Tiffany J. Callahan

TL;DR: Recent major extensions of the Human Phenotype Ontology for neurology, nephrology, immunology, pulmonology, newborn screening, and other areas are presented and new efforts to harmonize computational definitions of phenotypic abnormalities across the HPO and multiple phenotype ontologies used for animal models of disease are presented.

TL;DR: A consistent, common DQ terminology, organized into a logical framework, is an initial step in enabling data owners and users, patients, and policy makers to evaluate and communicate data quality findings in a well-defined manner with a shared vocabulary.

TL;DR: In this article, the authors identified 303 articles published before April 29, 2021, curated 59 relevant manuscripts that described clinical manifestations in 81 cohorts three weeks or more following acute COVID-19, and mapped 287 unique clinical findings to HPO terms.

TL;DR: In this article, the authors investigate the definitions used in the literature published to date and compare them against data available from electronic health records and patient-reported information collected via surveys, and conclude that Long COVID holds the potential to produce a second public health crisis on the heels of the pandemic itself.

TL;DR: KG-COVID-19 is created, a flexible framework that ingests and integrates heterogeneous biomedical data to produce knowledge graphs (KGs) and can be applied to other problems in which siloed biomedical data must be quickly integrated for different research applications, including future pandemics.