V
Valerie J. McKenzie
Researcher at University of Colorado Boulder
Publications - 60
Citations - 7124
Valerie J. McKenzie is an academic researcher from University of Colorado Boulder. The author has contributed to research in topics: Amphibian & Microbiome. The author has an hindex of 32, co-authored 54 publications receiving 5489 citations. Previous affiliations of Valerie J. McKenzie include National Ecological Observatory Network & University of Connecticut.
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Journal ArticleDOI
A communal catalogue reveals Earth’s multiscale microbial diversity
Luke R. Thompson,Luke R. Thompson,Luke R. Thompson,Jon G. Sanders,Daniel McDonald,Amnon Amir,Joshua Ladau,Kenneth J. Locey,Robert J. Prill,Anupriya Tripathi,Sean M. Gibbons,Sean M. Gibbons,Gail Ackermann,Jose A. Navas-Molina,Stefan Janssen,Evguenia Kopylova,Yoshiki Vázquez-Baeza,Antonio Gonzalez,James T. Morton,Siavash Mirarab,Zhenjiang Zech Xu,Lingjing Jiang,Mohamed F. Haroon,Jad N. Kanbar,Qiyun Zhu,Se Jin Song,Tomasz Kosciolek,Nicholas A. Bokulich,Joshua P Lefler,Colin J. Brislawn,Gregory Humphrey,Sarah M. Owens,Jarrad T. Hampton-Marcell,Jarrad T. Hampton-Marcell,Donna Berg-Lyons,Valerie J. McKenzie,Noah Fierer,Noah Fierer,Jed A. Fuhrman,Aaron Clauset,Rick Stevens,Rick Stevens,Ashley Shade,Katherine S. Pollard,Kelly D. Goodwin,Janet K. Jansson,Jack A. Gilbert,Jack A. Gilbert,Rob Knight +48 more
TL;DR: A meta-analysis of microbial community samples collected by hundreds of researchers for the Earth Microbiome Project is presented, creating both a reference database giving global context to DNA sequence data and a framework for incorporating data from future studies, fostering increasingly complete characterization of Earth’s microbial diversity.
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Introduced species and their missing parasites
TL;DR: The number of parasite species found in native populations is twice that found in exotic populations, and introduced populations are less heavily parasitized than are native populations.
Journal ArticleDOI
The amphibian skin-associated microbiome across species, space and life history stages.
Jordan G. Kueneman,Laura Wegener Parfrey,Douglas C. Woodhams,Holly M. Archer,Rob Knight,Rob Knight,Valerie J. McKenzie +6 more
TL;DR: High‐throughput 16S rRNA gene sequencing is used to examine the host and environmental influences on the skin microbiota of the cohabiting amphibian species Anaxyrus boreas, Pseudacris regilla, Taricha torosa and Lithobates catesbeianus from the Central Valley in California, and populations of Rana cascadae tadpoles.
Journal ArticleDOI
The Effects of Captivity on the Mammalian Gut Microbiome.
Valerie J. McKenzie,Se Jin Song,Se Jin Song,Frédéric Delsuc,Tiffany Prest,Angela M. Oliverio,Timothy M. Korpita,Alexandra Alexiev,Katherine R. Amato,Jessica L. Metcalf,Martin M. Kowalewski,Nico L. Avenant,Andrés Link,Anthony Di Fiore,Andaine Seguin-Orlando,Claudia Feh,Ludovic Orlando,Joseph R. Mendelson,Jon G. Sanders,Rob Knight +19 more
TL;DR: Differences in gut bacterial beta diversity between the captive and wild state were observed for most of the taxa surveyed, except the even-toed ungulates, and beta diversity variation was also strongly influenced by host taxonomic group, diet type, and gut fermentation physiology.
Journal ArticleDOI
Microbial community dynamics and effect of environmental microbial reservoirs on red-backed salamanders ( Plethodon cinereus )
Andrew H. Loudon,Douglas C. Woodhams,Laura Wegener Parfrey,Holly M. Archer,Rob Knight,Valerie J. McKenzie,Reid N. Harris +6 more
TL;DR: It is suggested that future experiments focus on testing whether core bacteria on salamander skin contribute to the observed resistance to chytridiomycosis in this species even under hygenic captive conditions, and using PICRUSt, an exploratory bioinformatics tool to predict gene functions, it is found that core skin bacteria provided similar gene functions to the entire community.