V
Vardges Ter-Hovhannisyan
Researcher at Georgia Institute of Technology
Publications - 3
Citations - 1844
Vardges Ter-Hovhannisyan is an academic researcher from Georgia Institute of Technology. The author has contributed to research in topics: Gene & Gene prediction. The author has an hindex of 3, co-authored 3 publications receiving 1543 citations.
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Gene prediction in novel fungal genomes using an ab initio algorithm with unsupervised training.
TL;DR: A new ab initio algorithm, GeneMark-ES version 2, that identifies protein-coding genes in fungal genomes that does not require a predetermined training set to estimate parameters of the underlying hidden Markov model (HMM).
Journal ArticleDOI
Gene identification in novel eukaryotic genomes by self-training algorithm
TL;DR: A self-training algorithm that had been assumed feasible only for prokaryotic genomes has now been developed for ab initio eukaryotic gene identification and tests have shown that the new method performs comparably or better than conventional methods where the supervised model training precedes the gene prediction step.
Journal ArticleDOI
Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)
Jason E. Stajich,Jason E. Stajich,Jason E. Stajich,Sarah K. Wilke,Dag Ahrén,Chun Hang Au,Bruce W. Birren,Mark Borodovsky,Claire Burns,Björn Canbäck,Lorna A. Casselton,Chi Keung Cheng,Jixin Deng,Jixin Deng,Fred S. Dietrich,David C. Fargo,David C. Fargo,Mark L. Farman,Allen C. Gathman,Jonathan M. Goldberg,Roderic Guigó,Patrick J. Hoegger,Patrick J. Hoegger,James B. Hooker,Ashleigh Huggins,Timothy Y. James,Takashi Kamada,Sreedhar Kilaru,Sreedhar Kilaru,Chinnapa Kodira,Ursula Kües,Doris M. Kupfer,Hoi Shan Kwan,Alexandre Lomsadze,Weixi Li,Walt W. Lilly,Li-Jun Ma,Aaron J. Mackey,Aaron J. Mackey,Gerard Manning,Francis Martin,Hajime Muraguchi,Donald O. Natvig,Heather J. Palmerini,Marilee A. Ramesh,Cathy J. Rehmeyer,Cathy J. Rehmeyer,Bruce A. Roe,Narmada Shenoy,Mario Stanke,Vardges Ter-Hovhannisyan,Anders Tunlid,Rajesh Velagapudi,Rajesh Velagapudi,Rajesh Velagapudi,Qiandong Zeng,Miriam E. Zolan,Patricia J. Pukkila +57 more
TL;DR: The mushroom Coprinopsis cinerea is a classic experimental model for multicellular development in fungi because it grows on defined media, completes its life cycle in 2 weeks, produces some 108 synchronized meiocytes, and can be manipulated at all stages in development by mutation and transformation.