Frankfurt Institute for Advanced Studies

About: Frankfurt Institute for Advanced Studies is a facility organization based out in Frankfurt am Main, Germany. It is known for research contribution in the topics: Baryon & Quark–gluon plasma. The organization has 798 authors who have published 2733 publications receiving 82799 citations. The organization is also known as: FIAS.

Identification of residues required for stalled-ribosome rescue in the codon-independent release factor YaeJ.

Abstract: The YaeJ protein is a codon-independent release factor with peptidyl-tRNA hydrolysis (PTH) activity, and functions as a stalled-ribosome rescue factor in Escherichia coli. To identify residues required for YaeJ function, we performed mutational analysis for in vitro PTH activity towards rescue of ribosomes stalled on a non-stop mRNA, and for ribosome-binding efficiency. We focused on residues conserved among bacterial YaeJ proteins. Additionally, we determined the solution structure of the GGQ domain of YaeJ from E. coli using nuclear magnetic resonance spectroscopy. YaeJ and a human homolog, ICT1, had similar levels of PTH activity, despite various differences in sequence and structure. While no YaeJ-specific residues important for PTH activity occur in the structured GGQ domain, Arg118, Leu119, Lys122, Lys129 and Arg132 in the following C-terminal extension were required for PTH activity. All of these residues are completely conserved among bacteria. The equivalent residues were also found in the C-terminal extension of ICT1, allowing an appropriate sequence alignment between YaeJ and ICT1 proteins from various species. Single amino acid substitutions for each of these residues significantly decreased ribosome-binding efficiency. These biochemical findings provide clues to understanding how YaeJ enters the A-site of stalled ribosomes.

Plasmon excitations in metal clusters and fullerenes

Abstract: This paper gives a survey of physical phenomena manifesting themselves in electron and photon collisions with atomic clusters. The emphasis is made on electron scattering, photoabsorption and photoionization of fullerenes and metal clusters, however some results are applicable to other types of clusters as well. It is demonstrated that the diffraction and interference phenomena play an important role in the processes of clusters interaction with photons and electrons. The essential role of the multipole surface and volume plasmon excitations is elucidated in the formation of electron energy loss spectra on clusters as well as in the total inelastic scattering cross sections and in multiphoton absorption regime. Attention is paid to the elucidation of the role of the polarization interaction in low energy electron-cluster collisions. This problem is considered for the electron attachment to metallic clusters and the plasmon enhanced photon emission. The mechanisms of electron excitation widths formation and the relaxation of electron excitations in metal clusters and fullerenes are discussed.