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Open AccessJournal ArticleDOI

Allele specificity of structural requirement for peptides bound to HLA-DRB1*0405 and -DRB1*0406 complexes: Implication for the HLA-associated susceptibility to methimazole-induced insulin autoimmune syndrome

TLDR
Interestingly, the quantitative structural motif identified in this study predicted that 8TSICSLYQLE17 of human insulin alpha chain may bind specifically to DRB1*0406 using its 10IxxLxQ15 motif, which may lead to the activation of self-insulin-specific T-helper cells.
Abstract
Self-peptides bound to HLA-DR4 (DRA-DRB1*0405 complex) were eluted from the purified DR4 complex, fractionated on reverse-phase HPLC, and subjected to NH2-terminal sequencing. Seven independent sequences were obtained, and all putative peptides synthesized bound to DRB1*0405 as well as DRB1*0406 complex, which differ only at DR beta residues 37, 57, 74, and 86. Binding assay using analogue peptides of a DR4 binder GSTVFDNLPNPE revealed that FxxLxN is an important anchor motif necessary for binding (where x is any amino acid), which was common to DRB1*0405 and 0406. Determination of the binding affinity of 60 synthetic AAFAALANAA-based analogue peptides showed that substituting F to W or C; L to F, W, or Y; and N to Q or S on AAFAALANAA changed the affinity substantially between DRB1*0405 and DRB1*0406. It is noteworthy that all patients with methimazole-induced insulin autoimmune syndrome are positive for DRB1*0406 and negative for DRB1*0405. Interestingly, the quantitative structural motif identified in this study predicted that 8TSICSLYQLE17 of human insulin alpha chain may bind specifically to DRB1*0406 using its 10IxxLxQ15 motif. Indeed, DRB1*0406 complex bound 8TSICSLYQLE17 with a high affinity, and in striking contrast, DRB1*0405 complex did not. Furthermore, a short-term T cell line specific to human insulin established from a DRB1*0406-bearing individual did show reactivity with a peptide fragment containing the 10IxxLxQ15 motif. Although this fragment probably exists at a very low level under normal physiological conditions due to the disulfide bond between flanking cysteine residues (6Cys-11Cys), a reducing compound such as methimazole may cleave the disulfide bond in vivo and allow DR alpha-DRB1*0406 complex on antigen-presenting cells to bind much of the linear fragment of insulin alpha chain, which may lead to the activation of self-insulin-specific T-helper cells.

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Journal ArticleDOI

MHC ligands and peptide motifs: first listing.

TL;DR: A compendium of major histocompatibility complex (MHC) peptide motifs and MHC ligands known to date, together with a discussion of the methods used to gain this information, is provided.
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Chemistry of peptides associated with MHC class I and class II molecules

TL;DR: The sum of allele-specific peptide-MHC interaction requirements can be described as a motif, characterized by number, spacing and specificities of anchors, as well as the more degenerate preferences at non-anchor positions within the nonamer stretches, useful for T-cell epitope predictions.
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HLA DRB4 0101-restricted immunodominant T cell autoepitope of pyruvate dehydrogenase complex in primary biliary cirrhosis: evidence of molecular mimicry in human autoimmune diseases.

TL;DR: Six T cell clones specific for pyruvate dehydrogenase complex (PDC)-E2 peptides from four different patients with primary biliary cirrhosis are established using 33 different peptides of 17-20 amino acid residues corresponding to human PDC-E2 as stimulating antigens, demonstrating the presence of molecular mimicry at the T cell clonal level in human autoimmune diseases.
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Genetic analysis of type 1 diabetes using whole genome approaches

TL;DR: Primary etiological components ofIDDM1, the HLA-DQB1 and -DRB1 class II immune response genes, and of IDDM2, the minisatellite repeat sequence in the 5' regulatory region of the insulin gene on chromosome 11p15, have been identified.
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Tyrosinase Family Proteins Are Antigens Specific to Vogt-Koyanagi-Harada Disease

TL;DR: It is found that exposure of lymphocytes from patients with VKH disease to peptides (30-mer) derived from the tyrosinase family proteins led to significant proliferation of the lymphocytes.
References
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Journal ArticleDOI

Three-dimensional structure of the human class II histocompatibility antigen HLA-DR1

TL;DR: A dimer of the class II αβ heterodimers is seen in the crystal forms of HLA-DR1, suggesting class II HLA dimerization as a mechanism for initiating the cytoplasmic signalling events in T-cell activation.
Journal ArticleDOI

Crystal structure of the human class II MHC protein HLA-DR1 complexed with an influenza virus peptide

TL;DR: An influenza virus peptide binds to HLA-DR1 in an extended conformation with a pronounced twist, providing a universal mode of peptide binding, distinct from the strategy used by class I histocompatibility proteins.
Journal ArticleDOI

Sequence analysis of peptides bound to MHC class II molecules

TL;DR: The finding of predominant self peptides has interesting implications for antigen processing and self–non-self discrimination.
Journal ArticleDOI

Specificity and promiscuity among naturally processed peptides bound to HLA-DR alleles.

TL;DR: Most of the peptides derived from endogenous proteins that intersect the endocytic/class II pathway, even though class II molecules are thought to function mainly in the presentation of exogenous foreign peptide antigens, were derived from major histocompatibility complex-related molecules.
Journal ArticleDOI

Predominant naturally processed peptides bound to HLA-DR1 are derived from MHC-related molecules and are heterogeneous in size

TL;DR: The characterization of acid-eluted peptides bound to HLA-DR1 by high-performance liquid chromatography, mass spectrometry and microsequencing analyses confirmed that all of the isolated peptides had high affinity for the groove of DR1.
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