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Biochemical Control of Calcium Carbonate Precipitation in Modern Lagoonal Microbialites, Tikehau Atoll, French Polynesia

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TLDR
The comparison between amino acid and monosaccharide composition of purified cyanobacterially produced organic matter and that of intramineral organic matrices associated with carbonate precipitates emphasizes the importance of dicarboxylic acids released by the decay of cyanobacterial sheaths, in CaCO3 formation.
Abstract
Hemispheroidal domes (microbialites) produced by natural populations of filamentous cyanobacteria belonging to four distinct Phormidium species, and one probable new species of Schizothrix were collected alive from 0-25 m depth habitates in the lagoon of Tikehau atoll (Tuamotu, French Polynesia). This study aims to establish the biochemical control on in-situ carbonate precipitation processes ("organomineralization" processes) occuring merely in the alveolate network of non-coalescent microfibrils that characterizes the degraded parts of the microbialite domes. The comparison between amino acid and monosaccharide composition of purified cyanobacterially produced organic matter and that of intramineral (soluble and insoluble) organic matrices associated with carbonate precipitates emphasizes the importance of dicarboxylic (aspartic and glutamic) acids, released by the decay of cyanobacterial sheaths, in CaCO3 formation and demonstrates that the in situ precipitation of ultra-fine micrites is a highly selective process regarding the available external organic matter. This diagenetic process is thought to result from incipient hydrolysis of cyanobacterial S-layer proteins attached to extracellular polysaccharide fibrils composing the sheath. Taxonomic affinity of cyanobacterial populations responsible for microbialite construction is one of the major factors allowing biochemical discrimination of in-situ precipitated carbonates, indicating that specific mucilages or their degradational products are guiding forces for the calcification processes. Another possible source for the formation of carbonate-associated organic matrices is derived from metabolites (e.g. mucus) released in water by lagoonal dwelling benthic organisms.

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Citations
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Microbial Extracellular Polymeric Substances (EPSs) in Ocean Systems.

TL;DR: An overview of the roles of exopolymer in oceans suggests that EPS contribute to efficient trophic-transfer of environmental contaminants, and may provide a protective refugia for pathogenic cells within marine systems; one that enhances their survival/persistence.
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Sulfate reducing bacteria in microbial mats: Changing paradigms, new discoveries

TL;DR: New preliminary findings on both the diversity and distribution of y-proteobacterial SRB in lithifying and non-lithifying microbial mat systems are presented and demonstrate the close microspatial association of SRB and cyanobacteria in the oxic zone of the mat.
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Nanoscale detection of organic signatures in carbonate microbialites.

TL;DR: In this paper, the authors characterize modern calcareous microbialites from the alkaline Lake Van, Turkey, at the nanometer scale by combining x-ray and electron microscopies.
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The Meaning of Stromatolites

TL;DR: In this paper, a model that integrates stromatolite scales, macroscopic organization, and shapes could also help test the biogenicity of the oldest stromata.
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Calcite and Aragonite Precipitation Under Controlled Instantaneous Supersaturation: Elucidating the Role of CaCO3 Saturation State and Mg/Ca Ratio on Calcium Carbonate Polymorphism

TL;DR: In this article, the role of instantaneous supersaturation and solution Mg/Ca ratio in calcium carbonate mineralogy and composition was delineated, and the transition between the aragonite and the calcite+aragonite precipitation fields is controlled by a combination of the saturation state of the solution with respect to CaCO3 and the mg/ca ratio in solution.
References
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Journal ArticleDOI

Microbial carbonates: the geological record of the calcified bacterial-algal mats and biofilms

TL;DR: For example, in this article, the main component is dense, clotted or peloidal micrite resulting from calcification of bacterial cells, sheaths and biofilm, and from phytoplankton-stimulated whiting nucleation.
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Microbialites; organosedimentary deposits of benthic microbial communities

TL;DR: Microbialites are organosedimentary deposits formed from interaction between benthic microbial communities (BMCs) and detrital or chemical sediments.
Journal ArticleDOI

S-Layer Proteins

TL;DR: Cell walls are an important structural component of prokaryotic organisms and essential for many aspects of their life, and the diverse structures of the outermost boundary layers strongly reflect adaptations to specific ecological and environmental conditions.
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Photosynthesis-induced biofilm calcification and calcium concentrations in Phanerozoic oceans.

TL;DR: It is shown that Phanerozoic oceans sustaining calcified cyanobacteria must have had considerably higher calcium concentrations than oceans of today, which can now be explained as a result of high dissolved inorganic carbon concentrations.
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