Journal ArticleDOI
Colonization dynamics of Klebsiella pneumoniae in the pet animals and human owners in a single household.
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In this paper, the clonality of Klebsiella pneumoniae isolates was examined from the fecal samplings of a healthy married couple and their pet animals during Sep. 2015 to Oct. 2016.About:
This article is published in Veterinary Microbiology.The article was published on 2021-03-23. It has received 4 citations till now. The article focuses on the topics: Klebsiella pneumoniae & Population.read more
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One Health or Three? Transmission modelling of Klebsiella isolates reveals ecological barriers to transmission between humans, animals and the environment
Harry A. Thorpe,Ross D. Booton,Teemu Kallonen,Marjorie J. Gibbon,Natacha Couto,Virginie Passet,Juan Sebastian Lopez Fernandez,Carla Rodrigues,Louise Matthews,Sonia Mitchell,Richard Reeve,Sophia David,Cristina Merla,Marta Corbella,Carolina Ferrari,Francesco Comandatore,Piero Marone,Sylvain Brisse,Davide Sassera,Jukka Corander,Jukka Corander,Edward J. Feil +21 more
TL;DR: In this article, the authors report an analysis of 6548 samples and 3,482 genome sequences representing 15 Klebsiella species sampled over a 15-month period from a wide range of clinical, community, animal and environmental settings in and around the city of Pavia, in the northern Italian region of Lombardy.
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Detection of Klebsiella pneumoniae human gut carriage: a comparison of culture, qPCR, and whole metagenomic sequencing methods
Kenneth Lindstedt,Dorota Buczek,Torunn Pedersen,Erik Hjerde,Niclas Raffelsberger,Yutaka Suzuki,Sylvain Brisse,Kathryn E. Holt,Ørjan Samuelsen,Arnfinn Sundsfjord +9 more
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A nosocomial salmonellosis outbreak caused by blaOXA-48-carrying extensively drug-resistant Salmonella enterica serovar Goldcoast in a hospital respiratory care ward in Taiwan.
Chih-Ming Chen,Huimin Tang,Se-Chin Ke,Yi Pei Lin,Min Liu,Yi-Chyi Lai,Bo Chen,You-Wun Wang,Ru-Hsiou Teng,Chien-Shun Chiou +9 more
TL;DR: A nosocomial salmonellosis outbreak caused by Salmonella enterica serovar Goldcoast occurred in a respiratory care ward (RCW) of a hospital in central Taiwan between December 24, 2020, and January 21, 2021 as discussed by the authors .
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Pandemic Clones of CTX-M-15 Producing Klebsiella pneumoniae ST15, ST147, and ST307 in Companion Parrots
Yamê Miniero Davies,Marcos Paulo Vieira Cunha,Milena Dropa,Nilton Lincopan,Vasco Tulio de Moura Gomes,Luisa Zanolli Moreno,Maria Inês Zanoli Sato,Andrea Micke Moreno,Terezinha Knöbl +8 more
TL;DR: Genomic analysis revealed that CTX-M-15-positive strains belonged to sequence types (STs) ST15, ST147, and ST307, characterized as international clones associated with outbreaks of healthcare-associated infections (HAIs) worldwide.
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Journal ArticleDOI
Identification of acquired antimicrobial resistance genes
Ea Zankari,Henrik Hasman,Salvatore Cosentino,Martin Vestergaard,Simon Rasmussen,Ole Lund,Frank Møller Aarestrup,Mette Voldby Larsen +7 more
TL;DR: A web server providing a convenient way of identifying acquired antimicrobial resistance genes in completely sequenced isolates was created, and the method was evaluated on WGS chromosomes and plasmids of 30 isolates.
Journal ArticleDOI
In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
Alessandra Carattoli,Ea Zankari,Aurora García-Fernández,Mette Voldby Larsen,Ole Lund,Laura Villa,Frank Møller Aarestrup,Henrik Hasman +7 more
TL;DR: Two easy-to-use Web tools for in silico detection and characterization of whole-genome sequence (WGS) and whole-plasmid sequence data from members of the family Enterobacteriaceae are designed and developed.
Journal ArticleDOI
BLAST Ring Image Generator (BRIG) : simple prokaryote genome comparisons
TL;DR: BRIG is a cross-platform application that enables the interactive generation of comparative genomic images via a simple graphical-user interface and will perform all required file parsing and BLAST comparisons automatically.
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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads.
TL;DR: Tests on both synthetic and real reads show Unicycler can assemble larger contigs with fewer misassemblies than other hybrid assemblers, even when long-read depth and accuracy are low.
Journal ArticleDOI
PHAST: A Fast Phage Search Tool
TL;DR: PHAge Search Tool (PHAST) is a web server designed to rapidly and accurately identify, annotate and graphically display prophage sequences within bacterial genomes or plasmids.