scispace - formally typeset
Journal ArticleDOI

Molecular characterization of a β-1,4-endoglucanase from an endophytic Bacillus pumilus strain

Reads0
Chats0
TLDR
The gene EglA encodes a β-1,4-endoglucanase capable of hydrolyzing cellulose under in vitro conditions and has an optimum pH range of 5–8, and remarkable heat stability, retaining more than 85% activity even after a 24-h incubation at pH 6–8.6.
Abstract
Endophytes comprise mainly microorganisms that colonize inner plant tissues, often living with the host in a symbiotic manner. Several ecological roles have been assigned to endophytic fungi and bacteria, such as antibiosis to phytopathogenic agents and plant growth promotion. Nowadays, endophytes are viewed as a new source of genes, proteins and biochemical compounds that may be used to improve industrial processes. In this study, the gene EglA was cloned from a citrus endophytic Bacillus strain. The EglA encodes a β-1,4-endoglucanase capable of hydrolyzing cellulose under in vitro conditions. The predicted protein, EglA, has high homology to other bacterial cellulases and shows a modular structure containing a catalytic domain of the glycosyl hydrolase family 9 (GH9) and a cellulose-binding module type 3 (CBM3). The enzyme was expressed in Escherichia coli, purified to homogeneity, and characterized. EglA has an optimum pH range of 5–8, and remarkable heat stability, retaining more than 85% activity even after a 24-h incubation at pH 6–8.6. This characteristic is an important feature for further applications of this enzyme in biotechnological processes in which temperatures of 50–60°C are required over long incubation periods.

read more

Citations
More filters
Journal ArticleDOI

Endophytic Bacterial Communities in Ginseng and their Antifungal Activity Against Pathogens

TL;DR: Investigation of the diversity of bacterial endophytes associated with ginseng roots cultivated in three different areas in Korea found that most of the low G+C Gram-positive bacteria with antifungal activity against phytopathogenic microorganisms showed cellulolytic enzyme activity while some Proteobacteria with the antifundal activity and the high G-G Gram- positive bacteria did not show any cellulolytics activity.

Production and characterisation of cellulase from Bacillus pumilus EB3

TL;DR: Characterisation of the enzyme found that CMCase from Bacillus pumilus EB3 has a molecular weight range from 30-65 kDa and was optimally active at pH 6.0 and temperature 60°C, and retained its activity over a wide pH range and temperature range.
Patent

Polypeptides Having Endoglucanase Activity and Polynucleotides Encoding Same

TL;DR: In this paper, isolated polypeptides having endoglucanase activity and isolated polynucleotides encoding the polyptides were described, as well as nucleic acid constructs, vectors, and host cells.
Journal ArticleDOI

ANTIFUNGAL COMPOUND PRODUCED BY THE CASSAVA ENDOPHYTE Bacillus pumilus MAIIIM4A

TL;DR: The bacterial endophytic localization was confirmed by cassava cell tissue examination using scanning electron microscopy, which allowed the identification of pumilacidin, an antifungal compound produced by B. pumilus MAIIIM4a.
References
More filters
Journal ArticleDOI

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

TL;DR: This assay is very reproducible and rapid with the dye binding process virtually complete in approximately 2 min with good color stability for 1 hr with little or no interference from cations such as sodium or potassium nor from carbohydrates such as sucrose.
Book

Molecular Cloning: A Laboratory Manual

TL;DR: Molecular Cloning has served as the foundation of technical expertise in labs worldwide for 30 years as mentioned in this paper and has been so popular, or so influential, that no other manual has been more widely used and influential.
Book

Molecular cloning : a laboratory manual

TL;DR: The content has been entirely recast to include nucleic-acid based methods selected as the most widely used and valuable in molecular and cellular biology laboratories.
Journal ArticleDOI

SWISS-MODEL and the Swiss-PdbViewer: an environment for comparative protein modeling.

Nicolas Guex, +1 more
- 01 Jan 1997 - 
TL;DR: An environment for comparative protein modeling is developed that consists of SWISS‐MODEL, a server for automated comparativeprotein modeling and of the SWiss‐PdbViewer, a sequence to structure workbench that provides a large selection of structure analysis and display tools.
Journal ArticleDOI

Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites.

TL;DR: A new method for the identification of signal peptides and their cleavage sites based on neural networks trained on separate sets of prokaryotic and eukaryotic sequence that performs significantly better than previous prediction schemes and can easily be applied on genome-wide data sets.
Related Papers (5)