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Open Source Software for Efficient and Transparent Reviews

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TLDR
An open source machine learning-aided pipeline applying active learning: ASReview is developed and it is demonstrated by means of simulation studies that ASReview can yield far more efficient reviewing than manual reviewing, while providing high quality.
Abstract
To help researchers conduct a systematic review or meta-analysis as efficiently and transparently as possible, we designed a tool (ASReview) to accelerate the step of screening titles and abstracts. For many tasks - including but not limited to systematic reviews and meta-analyses - the scientific literature needs to be checked systematically. Currently, scholars and practitioners screen thousands of studies by hand to determine which studies to include in their review or meta-analysis. This is error prone and inefficient because of extremely imbalanced data: only a fraction of the screened studies is relevant. The future of systematic reviewing will be an interaction with machine learning algorithms to deal with the enormous increase of available text. We therefore developed an open source machine learning-aided pipeline applying active learning: ASReview. We demonstrate by means of simulation studies that ASReview can yield far more efficient reviewing than manual reviewing, while providing high quality. Furthermore, we describe the options of the free and open source research software and present the results from user experience tests. We invite the community to contribute to open source projects such as our own that provide measurable and reproducible improvements over current practice.

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References
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Journal Article

Scikit-learn: Machine Learning in Python

TL;DR: Scikit-learn is a Python module integrating a wide range of state-of-the-art machine learning algorithms for medium-scale supervised and unsupervised problems, focusing on bringing machine learning to non-specialists using a general-purpose high-level language.
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Thematic Analysis: Striving to Meet the Trustworthiness Criteria

TL;DR: The process of conducting a thematic analysis is illustrated through the presentation of an auditable decision trail, guiding interpreting and representing textual data and exploring issues of rigor and trustworthiness.
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Rayyan-a web and mobile app for systematic reviews.

TL;DR: The strongest features of the app, identified and reported in user feedback, were its ability to help in screening and collaboration as well as the time savings it affords to users.
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