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Open AccessJournal ArticleDOI

Redox-linked conformational changes in proteins detected by a combination of infrared spectroscopy and protein electrochemistry. Evaluation of the technique with cytochrome c.

TLDR
Fourier-transform infrared spectroscopy has been used together with direct electrochemistry of the protein at a modified metal electrode surface and the resulting reduced-minus-oxidized infrared difference spectra show the changes in the frequencies and intensities of molecular vibrations which arise from the redox-linked conformational change.
Abstract
We have developed a new technique for the study of redox-linked conformational changes in proteins, by the combination of two established techniques. Fourier-transform infrared spectroscopy has been used together with direct electrochemistry of the protein at a modified metal electrode surface. The technique has been evaluated with cytochrome c, because of its well-characterized electrochemistry and because the availability of X-ray crystallographic and NMR studies of both redox states of the protein provides a reference against which our data can be compared. In electrochemical control experiments, it was confirmed that the spectroelectrochemical cell design allows fast, accurate and reproducible control of the redox poise of the protein. The resulting reducedminus-oxidized infrared difference spectra show the changes in the frequencies and intensities of molecular vibrations which arise from the redox-linked conformational change. In contrast to the absolute infrared spectra of proteins, such difference spectra can be sufficiently straightforward to allow interpretation at the level of individual bonds. A complete interpretation of the spectra is beyond the scope of the present paper: however, on the basis of the data presented, we are able to suggest assignments for all except one of the major bands between 1500 cm−1 and 1800 cm−1.

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Citations
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Journal ArticleDOI

Infrared spectroscopy of proteins.

TL;DR: This review discusses the application of infrared spectroscopy to the study of proteins by focusing on the mid-infrared spectral region and theStudy of protein reactions by reaction-induced infrared difference spectroscopic.
Journal ArticleDOI

The Use and Misuse of FTIR Spectroscopy in the Determination of Protein Structure

TL;DR: This review critically assess the application of FTIR spectroscopy to the determination of protein structure by outlining the principles underlying protein secondary structure determination by FTIRSpectroscopy, and highlighting the situations in which FTIR Spectroscopy should be considered the technique of choice.
Journal ArticleDOI

What vibrations tell us about proteins

TL;DR: This review deals with current concepts of vibrational spectroscopy for the investigation of protein structure and function, namely the amide I vibration of the polypeptide backbone that is used for secondary-structure analysis and some of the general aspects also apply to RamanSpectroscopy.
Journal ArticleDOI

Crystallographic and FTIR spectroscopic evidence of changes in Fe coordination upon reduction of the active site of the Fe-only hydrogenase from Desulfovibrio desulfuricans.

TL;DR: Both stereochemical and mechanistic considerations suggest that the small organic molecule found at the Fe-only hydrogenase active site and previously modeled as 1,3-propanedithiolate may, in fact, be di-(thiomethyl)-amine.
References
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Book

The infra-red spectra of complex molecules

TL;DR: In this article, the authors present a survey of research work in physics, physical sciences, and physical chemistry, focusing on physics, chemistry, physics, and biology. But they do not discuss their work in this paper.
Book ChapterDOI

Vibrational spectroscopy and conformation of peptides, polypeptides, and proteins.

TL;DR: The aim of this chapter is to present recent developments in the vibrational spectroscopy of peptides, polypeptides, and proteins.
Book ChapterDOI

Resolution-enhanced Fourier transform infrared spectroscopy of enzymes.

H Susi, +1 more
TL;DR: This chapter describes the basic principles, techniques, and applications of resolution-enhanced Fourier transform infrared spectroscopy, which provides several advantages over conventional dispersive techniques: higher resolution, sensitivity, signal-to-noise ratio (S/N), and frequency accuracy.
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