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Journal ArticleDOI

Resonant two-photon ionization study of jet-cooled amino acid: L-phenylalanine and its monohydrated complex

Kang Taek Lee, +4 more
- 29 Apr 2002 - 
- Vol. 116, Iss: 19, pp 8251-8254
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TLDR
In this article, L-phenylalanine (Phe), one of the aromatic amino acids, and its hydrated clusters were generated in supersonic expansion and investigated by resonant two-photon ionization.
Abstract
L-phenylalanine (Phe), one of the aromatic amino acids, and its hydrated clusters were generated in supersonic expansion and investigated by resonant two-photon ionization. Excitation spectra of Phe and Phe–(H2O)1 were obtained near their S0–S1 origins. We found that, by comparing the experimental results with the density functional theory and ab initio calculations, the water in Phe–(H2O)1 tends to form a cyclic hydrogen bond at the carboxyl group while inducing little change in the corresponding monomer structure. No sign of water making bridged hydrogen bonds with both polar groups was found. In order to form the cyclic hydrogen bond, hydration takes place only with the conformers whose carboxyl hydrogen is free, i.e., not occupied in the intramolecular hydrogen bonding with the amino nitrogen in the monomer.

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Citations
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Stepwise solvation of an amino acid: the appearance of zwitterionic structures.

TL;DR: Experimental and theoretical infrared spectra for tryptophan-watern complexes suggest that the zwitterionic structure becomes competitive in energy at the high end of the series, and a detailed comparison of the experimental and the theoretical spectra allows us to determine both the preferred solvent binding sites on the amino acid and the evolution of conformational structures of tryPTophan as the number of attached solvent molecules increases.
Journal ArticleDOI

Photoionization of 2-pyridone and 2-hydroxypyridine

TL;DR: Close to the ionization thresholds, the photoionization of 2-pyridone and its tautomer, 2-hydroxypyridine is found to be mainly dominated by a direct process whereas the indirect route (autoionization) may contribute at higher energies.
Journal ArticleDOI

Seven conformers of L-threonine in the gas phase: a LA-MB-FTMW study.

TL;DR: The rotational and nuclear quadrupole coupling constants extracted from the analysis of the rotational spectrum are directly compared with those predicted by ab initio methods to achieve the conclusive identification of seven different conformers as mentioned in this paper.
Journal ArticleDOI

Revealing the multiple structures of serine.

TL;DR: From the postexpansion abundances, the conformational stability trend is derived, which is controlled by the subtle network of intramolecular hydrogen bonds formed between the polar groups in the amino acid backbone and the hydroxy side chain.
Journal ArticleDOI

Competition between local conformational preferences and secondary structures in gas-phase model tripeptides as revealed by laser spectroscopy and theoretical chemistry

TL;DR: In this article, the gas-phase model tripeptides N-acetyl-Phe-Pro-NH2 and Nacetylpro-phe-NH 2 have been studied experimentally and theoretically in order to investigate the local conformational preferences of the peptide backbone and their competition with secondary structures under solvent-free conditions.
References
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Journal ArticleDOI

Density‐functional thermochemistry. III. The role of exact exchange

TL;DR: In this article, a semi-empirical exchange correlation functional with local spin density, gradient, and exact exchange terms was proposed. But this functional performed significantly better than previous functionals with gradient corrections only, and fits experimental atomization energies with an impressively small average absolute deviation of 2.4 kcal/mol.
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Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density

TL;DR: Numerical calculations on a number of atoms, positive ions, and molecules, of both open- and closed-shell type, show that density-functional formulas for the correlation energy and correlation potential give correlation energies within a few percent.
Journal ArticleDOI

Note on an Approximation Treatment for Many-Electron Systems

Chr. Møller, +1 more
- 01 Oct 1934 - 
TL;DR: In this article, a perturbation theory for treating a system of n electrons in which the Hartree-Fock solution appears as the zero-order approximation was developed, and it was shown by this development that the first order correction for the energy and the charge density of the system is zero.
Journal ArticleDOI

On the Number of Water Molecules Necessary To Stabilize the Glycine Zwitterion

TL;DR: A thorough ab initio study of how the addition of successive water molecules shifts the gas phase zwitterion-neutral equilibrium of the amino acid glycine toward that of the solution phase is presented in this paper.
Journal ArticleDOI

Getting into shape: Conformational and supramolecular landscapes in small biomolecules and their hydrated clusters

TL;DR: The last few years have seen a very rapid growth in understanding the influence of non-bonded, particularly hydrogen-bunded, molecules on shape and conformations of flexible molecules, including those of pharmacological or biological importance as discussed by the authors.
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