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Open AccessJournal ArticleDOI

The Arabidopsis SLEEPY1 Gene Encodes a Putative F-Box Subunit of an SCF E3 Ubiquitin Ligase

TLDR
The predicted SLY1 amino acid sequence is highly conserved among plants, indicating a key role in GA response, and suggests SCFSLY1-targeted degradation of RGA through the 26S proteasome pathway.
Abstract
The Arabidopsis SLY1 (SLEEPY1) gene positively regulates gibberellin (GA) signaling. Positional cloning of SLY1 revealed that it encodes a putative F-box protein. This result suggests that SLY1 is the F-box subunit of an SCF E3 ubiquitin ligase that regulates GA responses. The DELLA domain protein RGA (repressor of ga1-3) is a repressor of GA response that appears to undergo GA-stimulated protein degradation. RGA is a potential substrate of SLY1, because sly1 mutations cause a significant increase in RGA protein accumulation even after GA treatment. This result suggests SCFSLY1-targeted degradation of RGA through the 26S proteasome pathway. Further support for this model is provided by the observation that an rga null allele partially suppresses the sly1-10 mutant phenotype. The predicted SLY1 amino acid sequence is highly conserved among plants, indicating a key role in GA response.

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Journal ArticleDOI

Auxin: regulation, action, and interaction.

TL;DR: Nearly six decades after the structural elucidation of IAA, many aspects of auxin metabolism, transport and signalling are well established; however, more than a few fundamental questions and innumerable details remain unresolved.
Journal ArticleDOI

The ubiquitin 26S proteasome proteolytic pathway

TL;DR: Current understanding of the Ub/26S proteasome pathway in plants is described at the biochemical, genomic, and genetic levels, using Arabidopsis thaliana as the model, showing that this pathway is one of the most elaborate regulatory mechanisms in plants.
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Molecular Aspects of Seed Dormancy

TL;DR: The net result is a slightly heterogeneous response, thereby providing more temporal options for successful germination.
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A molecular framework for light and gibberellin control of cell elongation

TL;DR: Destabilization of this factor by phyB, together with its inactivation by DELLAs, constitutes a protein interaction framework that explains how plants integrate both light and GA signals to optimize growth and development in response to changing environments.
Journal ArticleDOI

Growth-defense tradeoffs in plants: a balancing act to optimize fitness.

TL;DR: Evidence supporting the growth-defense tradeoff concept is addressed, as well as known interactions between defense signaling and growth signaling, which should provide a foundation for the development of breeding strategies to maximize crop yield to meet rising global food and biofuel demands.
References
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Book

Molecular Cloning: A Laboratory Manual

TL;DR: Molecular Cloning has served as the foundation of technical expertise in labs worldwide for 30 years as mentioned in this paper and has been so popular, or so influential, that no other manual has been more widely used and influential.
Journal ArticleDOI

Basic Local Alignment Search Tool

TL;DR: A new approach to rapid sequence comparison, basic local alignment search tool (BLAST), directly approximates alignments that optimize a measure of local similarity, the maximal segment pair (MSP) score.
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A revised medium for rapid growth and bio assays with tobacco tissue cultures

TL;DR: In vivo redox biosensing resolves the spatiotemporal dynamics of compartmental responses to local ROS generation and provide a basis for understanding how compartment-specific redox dynamics may operate in retrograde signaling and stress 67 acclimation in plants.
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Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana

TL;DR: The modified method should facilitate high-throughput transformation of Arabidopsis for efforts such as T-DNA gene tagging, positional cloning, or attempts at targeted gene replacement.
Journal ArticleDOI

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana.

TL;DR: This is the first complete genome sequence of a plant and provides the foundations for more comprehensive comparison of conserved processes in all eukaryotes, identifying a wide range of plant-specific gene functions and establishing rapid systematic ways to identify genes for crop improvement.
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