Theoretical models on the Cu2O2 torture track: mechanistic implications for oxytyrosinase and small-molecule analogues.
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Citations
Ab initio calculation of vibrational absorption and circular dichroism spectra using density functional force fields
Density functional theory for transition metals and transition metal chemistry
Copper Active Sites in Biology
The restricted active space followed by second-order perturbation theory method : Theory and application to the study of CUO2 and CU2O2 systems
Progress and Challenges in the Calculation of Electronic Excited States
References
Density‐functional thermochemistry. III. The role of exact exchange
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
Density-functional exchange-energy approximation with correct asymptotic behavior.
Accurate and simple analytic representation of the electron-gas correlation energy
Ab Initio Calculation of Vibrational Absorption and Circular Dichroism Spectra Using Density Functional Force Fields
Related Papers (5)
Development of the Colle-Salvetti correlation-energy formula into a functional of the electron density
Frequently Asked Questions (14)
Q2. What is the fundamental challenge of the Cu2O2 reaction coordinate?
The fundamental challenge is that along the reaction coordinate itself, irrespective of the number or nature of the ligands on the copper, there are large changes in the contributions of dynamical and nondynamical electron correlation to the molecular energies.
Q3. What is the motivation for developing local variants of these approaches?
Given the utility of the reasonably well converged CR-CC results as benchmarks for systems 0-3, and in particular of the newly developed size-extensive CR-CCSD(T)L method, there is a strong motivation to develop local variants of these approaches so that they may be applied to metalloenzyme models with more realistic ligands.
Q4. What is the typical example of a system with large nondynamical correlation effects?
A typical example of a system with large nondynamical correlation effects is a singlet biradical, where two determinants (at least) that differ by a double excitation are required for a formally correct description of the singlet configuration.
Q5. What was the energy for a structure of 2 as a function of F?
The energies for structures of 2 as a function of F were also computed at all levels of theory using the BS1 basis set, except that consideration of quadruple excitations was no longer practical at the CC levels.
Q6. What is the corresponding orbital position for the bis(-oxo) structure?
The corresponding orbitals may be found in the occupied and virtual manifolds, respectively, for the bis(µ-oxo) structure (F ) 0), but they are now located as HOMO-2 and LUMO+1, respectively, so that magnetic exchange is substantially reduced.
Q7. What is the effect of quadruples on the energy corrections?
The authors observe the effect of quadruple excitations to be quite small once the complete renormalization of the energy corrections to CCSD energies due to higher-than-double excitations is accomplished, suggesting that this aspect of the calculation is well converged.
Q8. What is the degree of convergence associated with the inclusion of higher-order cluster components in the calculations?
With respect to CC and CR-CC methods, one degree of convergence is associated with the inclusion of higher-order cluster components (triples, quadruples, etc.) in the calculations.
Q9. How much more stable is the bis(-oxo) isomer 4a?
Consistent with results for 0-3, B3LYP predicts the µ-η2:η2 peroxo isomer 4b to be more stable than the bis(µ-oxo) isomer 4a by about a 20 kcal mol-1 larger margin than does BLYP.
Q10. How does the variation in relative energies of the CASPT2 and CR-CC?
The variation in relative energies as a function of theoretical level returns to being very large for 3, roughly 90 kcal mol-1 for 30.
Q11. How stable were the mPW1PW91 and MPW1K functionals?
With the hybrid functionals, on the other hand, all structures with F g 40 were unstable to symmetry breaking, and with the mPW1PW91 and MPW1K functionals, the F ) 0 and F ) 20 solutions were also found to be unstable.
Q12. How large is the variation in relative energies as a function of theoretical level?
Similar to 0, the variation in relative energies as a function of theoretical level is very large: just under 80 kcal mol-1 for 10.
Q13. What is the way to model Cu2O2 systems?
In summary, then, the experimental and theoretical data appear to support the use of pure DFT functionals for the modeling of Cu2O2 systems, especially if larger ligands are to be modeled that render the otherwise quantitatively similar CRCC or MRCI methods less practical at this time.
Q14. How can one gain insight into the convergence of the expansion used?
In practice, one must truncate these series expansions in actual systems, but by varying the point of truncation, one can gain insight into the convergence of the expansion used.