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Typing of deoxyribonucleic acid (DNA) extracted from compact bone from human remains.

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TLDR
The results suggest that amplification and typing of DNA extracted from compact bone of human remains could be useful in establishing the identity of a person, as well as in excluding possible false identifications.
Abstract
The application of deoxyribonucleic acid (DNA) typing methods for the potential identification of unknown human remains was investigated. DNA was isolated from compact bone tissue from badly decomposed bodies and from known and unknown human remains, using a decalcification and ion wash procedure. Restriction fragment length polymorphism (RFLP) analysis of variable number of tandem repeats (VNTR) loci yielded results in some cases, but more often the DNA was too degraded to produce RFLP patterns. No RFLP profiles could be obtained from putrified soft tissues. However, DNA extracted from compact bone tissue of human remains up to eleven years old was successfully amplified using the polymerase chain reaction (PCR) for the VNTR loci D1S80, D17S5, COL2A1, and APO B, as well as the HLA-DQ alpha locus. This is especially significant, since PCR results were obtained from those samples whose DNA had been degraded substantially and had yielded no RFLP patterns. All DNA types determined from the compact bone tissue from decomposed bodies whose identification had been established first by other means (and whose parents or offspring were available for typing) demonstrated mendelian inheritance of the alleles of the loci analyzed. These results suggest that amplification and typing of DNA extracted from compact bone of human remains could be useful in establishing the identity of a person, as well as in excluding possible false identifications.

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Citations
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Use of bleach to eliminate contaminating DNA from the surface of bones and teeth

TL;DR: Endogenous DNA proved to be quite stable to even extreme sodium hypochlorite treatments, suggesting that DNA adsorbs to hydroxyapatite in the bone and that this process facilitates the preservation of DNA in ancient skeletal remains.
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High efficiency DNA extraction from bone by total demineralization.

TL;DR: A real-time quantification assay based on the amplification of a 143 bp mtDNA fragment showed that this new demineralization protocol significantly enhances the quantity of DNA that can be extracted and amplified from degraded skeletal remains.
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Validation of short tandem repeats (STRs) for forensic usage: performance testing of fluorescent multiplex STR systems and analysis of authentic and simulated forensic samples.

TL;DR: The data demonstrate that the commercially available multiplex kits can be used to amplify and type STR loci successfully from DNA derived from human biological specimens.
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DNA Extraction Strategies for Amplified Fragment Length Polymorphism Analysis

TL;DR: A modification of an existing differential extraction procedure for separating non-sperm from sperm DNA was developed and the method judged most suitable for AMP-FLP analysis was organic extraction followed by Centricon 100® dialysis and concentration, with BSA added to the amplification reaction.
References
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Journal ArticleDOI

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia.

TL;DR: Two new methods were used to establish a rapid and highly sensitive prenatal diagnostic test for sickle cell anemia, using primer-mediated enzymatic amplification of specific beta-globin target sequences in genomic DNA, resulting in the exponential increase of target DNA copies.
Journal ArticleDOI

Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes

TL;DR: A method by which one can simultaneously screen a sample for all known allelic variants at an amplified locus is described, applied to HLA-DQA genotyping and to the detection of Mediterranean beta-thalassemia mutations.
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Rapid typing of tandemly repeated hypervariable loci by the polymerase chain reaction: application to the apolipoprotein B 3' hypervariable region.

TL;DR: The high sensitivity and inexpensive nature of this technique make it superior to traditional Southern blot analysis for typing the 3' apoB VNTR and directly applicable for rapid typing of other VN TRs in the human genome.
Journal ArticleDOI

Amplification of a variable number of tandem repeats (VNTR) locus (pMCT118) by the polymerase chain reaction (PCR) and its application to forensic science

TL;DR: Determination of genotypes at this VNTR locus can now be routinely achieved within 24 h, without the need for Southern blots or radioactive materials.
Journal ArticleDOI

Ancient bone DNA amplified

TL;DR: Reports the successful extraction and amplification of DNA from human bones between 300 and 5500 years of age and describes experimental technique and results on a range of bone samples.
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