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Yeast Prions: Structure, Biology, and Prion-Handling Systems

TLDR
The mechanism of faithful templating of protein conformation, the biological roles of these prions, and their interactions with cellular chaperones, the Btn2 and Cur1 aggregate-handling systems, and other cellular factors governing prion generation and propagation are reviewed.
Abstract
A prion is an infectious protein horizontally transmitting a disease or trait without a required nucleic acid. Yeast and fungal prions are nonchromosomal genes composed of protein, generally an altered form of a protein that catalyzes the same alteration of the protein. Yeast prions are thus transmitted both vertically (as genes composed of protein) and horizontally (as infectious proteins, or prions). Formation of amyloids (linear ordered β-sheet-rich protein aggregates with β-strands perpendicular to the long axis of the filament) underlies most yeast and fungal prions, and a single prion protein can have any of several distinct self-propagating amyloid forms with different biological properties (prion variants). Here we review the mechanism of faithful templating of protein conformation, the biological roles of these prions, and their interactions with cellular chaperones, the Btn2 and Cur1 aggregate-handling systems, and other cellular factors governing prion generation and propagation. Human amyloidoses include the PrP-based prion conditions and many other, more common amyloid-based diseases, several of which show prion-like features. Yeast prions increasingly are serving as models for the understanding and treatment of many mammalian amyloidoses. Patients with different clinical pictures of the same amyloidosis may be the equivalent of yeasts with different prion variants.

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Prion-like domains as epigenetic regulators, scaffolds for subcellular organization, and drivers of neurodegenerative disease.

TL;DR: This review highlights recent advances in understanding of the role of prions in enabling rapid adaptation to environmental stress in yeast and discusses the prevalence of the PrLD in nucleic-acid binding proteins that are often connected to neurodegenerative disease.
Journal ArticleDOI

Prion-like low-complexity sequences: Key regulators of protein solubility and phase behavior

TL;DR: It is argued that prion-like low-complexity regions (LCRs) are key regulators of protein solubility and folding and that prions have evolved to regulate protein phase behavior and to protect proteins against proteotoxic damage.
Journal ArticleDOI

Protein aggregation as a mechanism of adaptive cellular responses

TL;DR: Several protein bodies that differ in composition, packing, dynamics, size, and localization were originally discovered in budding yeast and are provided with a concise and comparative review of their nature and nomenclature.
Journal ArticleDOI

Yeast and Fungal Prions.

TL;DR: Yeast and fungal prions are infectious proteins, most being self-propagating amyloids of normally soluble proteins, an architecture that naturally suggests a mechanism by which a protein can template its conformation, just as DNA or RNA templates its sequence.
Journal ArticleDOI

The “Jekyll and Hyde” Actions of Nucleic Acids on the Prion-like Aggregation of Proteins

TL;DR: How nucleic acid binding might influence protein misfolding for both disease-related and benign, functional prions and why the line between bad and good amyloids might be more subtle than previously thought are discussed.
References
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Journal ArticleDOI

Global analysis of protein expression in yeast

TL;DR: A Saccharomyces cerevisiae fusion library is created where each open reading frame is tagged with a high-affinity epitope and expressed from its natural chromosomal location, and it is found that about 80% of the proteome is expressed during normal growth conditions.
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Mice devoid of PrP are resistant to scrapie

TL;DR: These experiments show that PrPC, possibly at close to normal levels, is required for the usual susceptibility to scrapie and that lack of homology between incoming prions and the host's PrP genes retards disease.
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Pathological α-Synuclein Transmission Initiates Parkinson-like Neurodegeneration in Nontransgenic Mice

TL;DR: It is found that in wild-type nontransgenic mice, a single intrastriatal inoculation of synthetic α- Syn fibrils led to the cell-to-cell transmission of pathologic α-Syn and Parkinson’s-like Lewy pathology in anatomically interconnected regions.
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Aggresomes, inclusion bodies and protein aggregation.

TL;DR: This work has suggested that, in animal cells, aggregated proteins are specifically delivered to inclusion bodies by dynein-dependent retrograde transport on microtubules and this microtubule-dependent inclusion body is called an aggresome.
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Hsp104, Hsp70, and Hsp40: A Novel Chaperone System that Rescues Previously Aggregated Proteins

TL;DR: It is concluded that Hsp104 has a protein remodeling activity that acts on trapped, aggregated proteins and requires specific interactions with conventional chaperones to promote refolding of the intermediates it produces.
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