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Angelina Angelova
Researcher at Heriot-Watt University
Publications - 19
Citations - 4244
Angelina Angelova is an academic researcher from Heriot-Watt University. The author has contributed to research in topics: Medicine & Genome. The author has an hindex of 7, co-authored 11 publications receiving 3851 citations. Previous affiliations of Angelina Angelova include University of Arizona & American Society for Engineering Education.
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Journal ArticleDOI
The B73 Maize Genome: Complexity, Diversity, and Dynamics
Patrick S. Schnable,Doreen Ware,Robert S. Fulton,Joshua C. Stein,Fusheng Wei,Shiran Pasternak,Chengzhi Liang,Jianwei Zhang,Lucinda Fulton,Tina Graves,Patrick Minx,Amy Denise Reily,Laura Courtney,Scott Kruchowski,Chad Tomlinson,Cindy Strong,Kim D. Delehaunty,Catrina Fronick,Bill Courtney,Susan M. Rock,Eddie Belter,Feiyu Du,Kyung Kim,Rachel Abbott,Marc Cotton,Andrew Levy,Pamela Marchetto,Kerri Ochoa,Stephanie M. Jackson,Barbara Gillam,Weizu Chen,Le Yan,Jamey Higginbotham,Marco Cardenas,Jason Waligorski,Elizabeth Applebaum,Lindsey Phelps,Jason Falcone,Krishna L. Kanchi,T. K. Thane,Adam Scimone,Nay Thane,Jessica Henke,Thomas J. Wang,Jessica Ruppert,Neha Shah,Kelsi Rotter,Jennifer S. Hodges,Elizabeth Ingenthron,Matt Cordes,Sara Kohlberg,Jennifer Sgro,Brandon Delgado,Kelly Mead,Asif T. Chinwalla,Shawn Leonard,Kevin Crouse,Kristi Collura,Dave Kudrna,Jennifer Currie,Ruifeng He,Angelina Angelova,Shanmugam Rajasekar,Teri Mueller,Rene Lomeli,Gabriel Scara,Ara Ko,Krista Delaney,Marina Wissotski,Georgina Lopez,David Campos,Michele Braidotti,Elizabeth Ashley,Wolfgang Golser,Hyeran Kim,Seunghee Lee,Jinke Lin,Zeljko Dujmic,Woojin Kim,Jayson Talag,Andrea Zuccolo,Chuanzhu Fan,Aswathy Sebastian,Melissa Kramer,Lori Spiegel,Lidia Nascimento,Theresa Zutavern,Beth Miller,Claude Ambroise,Stephanie Muller,William Spooner,Apurva Narechania,Liya Ren,Sharon Wei,Sunita Kumari,Ben Faga,Michael J. Levy,Linda McMahan,Peter Van Buren,Matthew W. Vaughn,Kai Ying,Cheng Ting Yeh,Scott J. Emrich,Scott J. Emrich,Yi Jia,Ananth Kalyanaraman,Ananth Kalyanaraman,An-Ping Hsia,W. Brad Barbazuk,Regina S. Baucom,Thomas P. Brutnell,Nicholas C. Carpita,Cristian Chaparro,Jer Ming Chia,Jean-Marc Deragon,James C. Estill,Yan Fu,Jeffrey A. Jeddeloh,Yujun Han,Hye-Ran Lee,Pinghua Li,Damon Lisch,Sanzhen Liu,Zhijie Liu,Dawn H. Nagel,Maureen C. McCann,Phillip SanMiguel,Alan M. Myers,Dan Nettleton,John D. Nguyen,Bryan W. Penning,Lalit Ponnala,Kevin L. Schneider,David C. Schwartz,Anupma Sharma,Carol Soderlund,Nathan M. Springer,Qi Sun,Hao Wang,Michael S. Waterman,Richard P. Westerman,Thomas K. Wolfgruber,Lixing Yang,Yeisoo Yu,Lifang Zhang,Shiguo Zhou,Qihui Zhu,Jeffrey L. Bennetzen,R. Kelly Dawe,Jiming Jiang,Ning Jiang,Gernot G. Presting,Susan R. Wessler,Srinivas Aluru,Srinivas Aluru,Robert A. Martienssen,Sandra W. Clifton,W. Richard McCombie,Rod A. Wing,Richard K. Wilson +159 more
TL;DR: The sequence of the maize genome reveals it to be the most complex genome known to date and the correlation of methylation-poor regions with Mu transposon insertions and recombination and how uneven gene losses between duplicated regions were involved in returning an ancient allotetraploid to a genetically diploid state is reported.
Journal ArticleDOI
Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.
Carol Soderlund,Anne Descour,Dave Kudrna,Matthew Bomhoff,Lomax Boyd,Jennifer Currie,Angelina Angelova,Kristi Collura,Marina Wissotski,Elizabeth Ashley,Darren J. Morrow,John Fernandes,Virginia Walbot,Yeisoo Yu +13 more
TL;DR: Full-length cDNA (FLcDNA) sequencing establishes the precise primary structure of individual gene transcripts in the maize genome, suggesting that rare transcripts are well-enriched in this FLcDNA set.
Journal ArticleDOI
RiTE database: A resource database for genus-wide rice genomics and evolutionary biology
Dario Copetti,Dario Copetti,Jianwei Zhang,Moaine El Baidouri,Moaine El Baidouri,Dongying Gao,Jun Wang,Elena Barghini,Rosa Maria Cossu,Angelina Angelova,E L Carlos Maldonado,Stefan Roffler,Hajime Ohyanagi,Thomas Wicker,Chuanzhu Fan,Andrea Zuccolo,Mingsheng Chen,Antonio Costa de Oliveira,Bin Han,Robert J Henry,Yue-Ie C. Hsing,Nori Kurata,Wen Wang,Scott A. Jackson,Olivier Panaud,Rod A. Wing,Rod A. Wing +26 more
TL;DR: This is the first report of a repeat dataset that spans the majority of repeat variability within an entire genus, and one that includes complete elements as well as unassembled repeats.
Journal ArticleDOI
De Novo Next Generation Sequencing of Plant Genomes
Steve Rounsley,Pradeep Reddy Marri,Yeisoo Yu,Ruifeng He,Nick Sisneros,Jose Luis Goicoechea,So Jeong Lee,Angelina Angelova,Dave Kudrna,Meizhong Luo,Jason P. Affourtit,Brian Desany,James R. Knight,Faheem Niazi,Michael Egholm,Rod A. Wing +15 more
TL;DR: This work presents a strategy that combines cutting edge next generation sequencing with “old school” genomics resources and allows rapid cost-effective sequencing of plant genomes.
Journal ArticleDOI
Detailed analysis of a contiguous 22-Mb region of the maize genome.
Fusheng Wei,Joshua C. Stein,Chengzhi Liang,Jianwei Zhang,Robert S. Fulton,Regina S. Baucom,Emanuele De Paoli,Shiguo Zhou,Lixing Yang,Yujun Han,Shiran Pasternak,Apurva Narechania,Lifang Zhang,Cheng Ting Yeh,Kai Ying,Dawn H. Nagel,Kristi Collura,David Kudrna,Jennifer Currie,Jinke Lin,Hyeran Kim,Angelina Angelova,Gabriel Scara,Marina Wissotski,Wolfgang Golser,Laura Courtney,Scott Kruchowski,Tina Graves,Susan M. Rock,Stephanie Adams,Lucinda Fulton,Catrina Fronick,William Courtney,Melissa Kramer,Lori Spiegel,Lydia Nascimento,Ananth Kalyanaraman,Cristian Chaparro,Jean-Marc Deragon,Phillip San Miguel,Ning Jiang,Susan R. Wessler,Pamela J. Green,Yeisoo Yu,David C. Schwartz,Blake C. Meyers,Jeffrey L. Bennetzen,Robert A. Martienssen,W. Richard McCombie,Srinivas Aluru,Sandra W. Clifton,Patrick S. Schnable,Doreen Ware,Richard K. Wilson,Rod A. Wing +54 more
TL;DR: The results demonstrate the feasibility of refining the B73 RefGen_v1 genome assembly by incorporating optical map, high-resolution genetic map, and comparative genomic data sets and improvements in gene and repeat annotation will serve to promote future functional genomic and phylogenomic research in maize and other grasses.