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Annelie Mollbrink
Researcher at Royal Institute of Technology
Publications - 19
Citations - 3135
Annelie Mollbrink is an academic researcher from Royal Institute of Technology. The author has contributed to research in topics: Medicine & Biology. The author has an hindex of 10, co-authored 16 publications receiving 1518 citations. Previous affiliations of Annelie Mollbrink include Science for Life Laboratory.
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Journal ArticleDOI
Visualization and analysis of gene expression in tissue sections by spatial transcriptomics
Patrik L. Ståhl,Patrik L. Ståhl,Fredrik Salmén,Sanja Vickovic,Anna Lundmark,Anna Lundmark,José Fernández Navarro,José Fernández Navarro,Jens P. Magnusson,Stefania Giacomello,Michaela Asp,Jakub Orzechowski Westholm,Mikael Huss,Annelie Mollbrink,Sten Linnarsson,Simone Codeluppi,Åke Borg,Fredrik Pontén,Paul I. Costea,Pelin Sahlén,Jan Mulder,Olaf Bergmann,Joakim Lundeberg,Jonas Frisén +23 more
TL;DR: By positioning histological sections on arrayed reverse transcription primers with unique positional barcodes, this work demonstrates high-quality RNA-sequencing data with maintained two-dimensional positional information from the mouse brain and human breast cancer.
Journal ArticleDOI
Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma.
Andrew L. Ji,Adam J. Rubin,Kim Thrane,Sizun Jiang,David Reynolds,Robin M. Meyers,Margaret Guo,Benson M. George,Annelie Mollbrink,Joseph Bergenstråhle,Ludvig Larsson,Yunhao Bai,Bokai Zhu,Aparna Bhaduri,Jordan M. Meyers,Xavier Rovira-Clavé,S. Tyler Hollmig,Sumaira Z. Aasi,Garry P. Nolan,Joakim Lundeberg,Paul A. Khavari,Paul A. Khavari +21 more
TL;DR: To define the cellular composition and architecture of cutaneous squamous cell carcinoma (cSCC), single-cell RNA sequencing with spatial transcriptomics and multiplexed ion beam imaging from a series of human cSCCs and matched normal skin were combined.
Journal ArticleDOI
Spatiotemporal dynamics of molecular pathology in amyotrophic lateral sclerosis.
Silas Maniatis,Tarmo Äijö,Sanja Vickovic,Sanja Vickovic,Catherine E. Braine,Kristy Kang,Annelie Mollbrink,Delphine Fagegaltier,Žaneta Andrusivová,Sami Saarenpää,Gonzalo Saiz-Castro,Miguel Cuevas,Aaron Watters,Joakim Lundeberg,Joakim Lundeberg,Richard Bonneau,Hemali Phatnani +16 more
TL;DR: Spatiotemporal transcriptomics in ALS spinal cord models reveals dynamics of disease-driven gene regulation and identifies pathway dynamics, distinguish regional differences between microglia and astrocyte populations at early time points, and discern perturbations in several transcriptional pathways shared between murine models of ALS and human postmortem spinal cords.
Journal ArticleDOI
Barcoded solid-phase RNA capture for Spatial Transcriptomics profiling in mammalian tissue sections.
Fredrik Salmén,Fredrik Salmén,Patrik L. Ståhl,Annelie Mollbrink,José Fernández Navarro,Sanja Vickovic,Sanja Vickovic,Jonas Frisén,Joakim Lundeberg +8 more
TL;DR: A protocol describing how to apply the Spatial Transcriptomics technology to mammalian tissue is presented, which combines histological staining and spatially resolved RNA-sequencing data from intact tissue sections.
Journal ArticleDOI
A radical switch in clonality reveals a stem cell niche in the epiphyseal growth plate
Phillip T Newton,Phillip T Newton,Lei Li,Baoyi Zhou,Christoph Schweingruber,Maria Hovorakova,Meng Xie,Xiaoyan Sun,Lakshmi Sandhow,Artem V. Artemov,Artem V. Artemov,E. G. Ivashkin,Simon Suter,Vyacheslav Dyachuk,Vyacheslav Dyachuk,Maha El Shahawy,Amel Gritli-Linde,Thibault Bouderlique,Julian Petersen,Julian Petersen,Annelie Mollbrink,Joakim Lundeberg,Grigori Enikolopov,Hong Qian,Kaj Fried,Maria Kasper,Eva Hedlund,Igor Adameyko,Igor Adameyko,Lars Sävendahl,Andrei S. Chagin,Andrei S. Chagin +31 more
TL;DR: It is demonstrated that, in mice, longitudinal bone growth during fetal and neonatal periods relies on the gradual consumption of chondroprogenitors, whereas in adults, a stem cell niche is formed allowing renewing ofChondro Progenitors and leading to formation of large, stable monoclonal columns of chONDrocytes.