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Aysegul Guvenek
Researcher at Rutgers University
Publications - 11
Citations - 523
Aysegul Guvenek is an academic researcher from Rutgers University. The author has contributed to research in topics: Polyadenylation & Gene. The author has an hindex of 5, co-authored 8 publications receiving 373 citations. Previous affiliations of Aysegul Guvenek include Sabancı University.
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Journal ArticleDOI
Strength of Selection Pressure Is an Important Parameter Contributing to the Complexity of Antibiotic Resistance Evolution
Tugce Oz,Aysegul Guvenek,Sadik Yildiz,Enes Karaboga,Yusuf Talha Tamer,Nirva Mumcuyan,Vedat Burak Ozan,Gizem Hazal Senturk,Murat Cokol,Pamela J. Yeh,Erdal Toprak +10 more
TL;DR: It is suggested that selection strength is an important parameter contributing to the complexity of antibiotic resistance problem and use of high doses of antibiotics to clear infections has the potential to promote increase of cross-resistance in clinics.
Journal ArticleDOI
Quantifying the Determinants of Evolutionary Dynamics Leading to Drug Resistance
Guillaume Chevereau,Marta Dravecká,Tugce Batur,Aysegul Guvenek,Dilay Hazal Ayhan,Erdal Toprak,Tobias Bollenbach +6 more
TL;DR: This work comprehensively quantify the distribution of fitness effects of mutations, a key determinant of evolutionary dynamics, in the presence of eight antibiotics representing the main modes of action and identified novel quantitative characteristics of the evolutionary landscape that provide the conceptual foundation for predicting the dynamics of drug resistance evolution.
Journal ArticleDOI
Genome-wide analysis provides genetic evidence that ACE2 influences COVID-19 risk and yields risk scores associated with severe disease
Julie Horowitz,Jack A. Kosmicki,Amy Damask,Deepika Sharma,Genevieve H.L. Roberts,Anne E. Justice,Nilanjana Banerjee,Marie V. Coignet,Ashish Yadav,Joseph B. Leader,Anthony Marcketta,Danny S. Park,Evan Maxwell,Spencer C. Knight,Xiaodong Bai,Harendra Guturu,Dylan Sun,Asher Baltzell,Fabrício S. P. Kury,Joshua D. Backman,Ahna R. Girshick,Colm O'Dushlaine,Shannon McCurdy,Raghavendran Partha,Adam Mansfield,David A. Turissini,Miao Zhang,Joelle Mbatchou,Kyoko Watanabe,Lauren Gurski,Shane McCarthy,L. Dobbyn,Elisabeth Stahl,Anurag Verma,Giorgio Sirugo,Giovanni Coppola,Andrew Deubler,Aris Bass Economides,Katia Karalis,Luca A. Lotta,Alan R. Shuldiner,Christina Beechert,Caitlin Forsythe,Erin D. Fuller,Zhenhua Gu,Michael Lattari,Alexander Lopez,Maria Sotiropoulos Padilla,Manasi Pradhan,Kia Manoochehri,Thomas D. Schleicher,Louis Widom,Sarah E. Wolf,Ricardo H. Ulloa,Amelia Dadong Sameer Jeffrey Averitt Li Malhotra Staples,Amelia J Averitt,Dadong Li,Sameer Malhotra,Suying Bao,Boris Boutkov,Siying Chen,Gi Seon Eom,Alicia Hawes,Shareef Khalid,Olga A. Krasheninina,George Mitra,Mona Nafde,Sean O’Keeffe,Max Orelus,Razvan Panea,Tommy Polanco,Ayesha Ghulam Rasool,Jeffrey Staples,Kathie Sun,Jiwen Xin,Manuel A. R. Ferreira,Arkopravo Ghosh,Christopher Gillies,Eric Jorgenson,Hyun Min Kang,Michael Kessler,Alexander H. Li,Nan Lin,Daren Liu,Adam E. Locke,Arden Moscati,Charles Paulding,Carlo Sidore,Bin Ye,B. Zhang,Andrey Ziyatdinov,Ariane Ayer,Aysegul Guvenek,George Hindy,Jan Freudenberg,Jonas Bovijn,Kavita Praveen,Manav Kapoor,M. Haas,Moeen Riaz,Niek Verweij,Olukayode A. Sosina,Parsa Akbari,Priyanka Nakka,Sahar Gelfman,Sujit Gokhale,Tanima De,Veera M. Rajagopal,Gannie Tzoneva,Juan L. Rodriguez-Flores,Shek Man Chim,Valerio Donato,Daniel Fernandez,G. Della Gatta,Alessandro Di Gioia,Kristen Michelle Howell,Lori Khrimian,Minhee Kim,Hector Martinez,Lawrence Miloscio,Sheilyn Nunez,Elias Pavlopoulos,Trikaldarshi Persaud,Esteban Marcus B. Michelle G. Jason Lyndon J. Nirupama Nad Chen Jones LeBlanc Mighty Mitnaul Nishtala Rana,Esteban Chen,Michelle G. LeBlanc,Jason Mighty,Lyndon J. Mitnaul,N. Sudhir Nishtala,N. Rana,Marylyn D. Ritchie,Marcus B. Jones,Suganthi Balasubramanian,Katherine A. Siminovitch,William J Salerno,Daniel J. Rader,Tooraj Mirshahi,Jonathan Marchini,John D. Overton,David J. Carey,Lukas Habegger,Michael Cantor,Kristin A. Rand,Eurie L. Hong,Jeffrey G. Reid,Catherine A. Ball,Aris Baras,Gonçalo R. Abecasis +147 more
TL;DR: In this article , the authors identify a variant (rs190509934, minor allele frequency 0.2-2%) that downregulates ACE2 expression by 37% and reduces the risk of SARS-CoV-2 infection by 40% (odds ratio = 0.60, P = 4.5 × 10 − 13 ).
Journal ArticleDOI
Activity-Dependent Regulation of Alternative Cleavage and Polyadenylation During Hippocampal Long-Term Potentiation.
Mariana M. Fontes,Aysegul Guvenek,Riki Kawaguchi,Dinghai Zheng,Alden Y. Huang,Victoria M. Ho,Patrick B. Chen,Xiaochuan Liu,Thomas J. O'Dell,Giovanni Coppola,Bin Tian,Kelsey C. Martin +11 more
TL;DR: Detailed analysis of APA following induction of long-term potentiation of mouse hippocampal CA3-CA1 synapses reveals that activity-dependent APA provides an important layer of gene regulation during learning and memory.
Journal ArticleDOI
Analysis of alternative cleavage and polyadenylation in mature and differentiating neurons using RNA-seq data.
Aysegul Guvenek,Bin Tian +1 more
TL;DR: The data delineate APA profiles in different brain cells and indicate that APA regulation in neurogenesis is largely an augmented process taking place in other types of cell differentiation, including myogenesis and differentiation of embryonic stem cells into neurons.