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Bernie J. Daigle
Researcher at University of Memphis
Publications - 37
Citations - 1216
Bernie J. Daigle is an academic researcher from University of Memphis. The author has contributed to research in topics: Gene expression profiling & Stochastic simulation. The author has an hindex of 15, co-authored 34 publications receiving 1086 citations. Previous affiliations of Bernie J. Daigle include Stanford University & University of California, Santa Barbara.
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Journal ArticleDOI
Mucosal biofilm formation on middle-ear mucosa in the chinchilla model of otitis media.
Garth D. Ehrlich,Richard Harold Veeh,Xue Wang,J. William Costerton,Jay Hayes,Fen Z. Hu,Bernie J. Daigle,Miles D. Ehrlich,J. Christopher Post +8 more
TL;DR: Preliminary findings provide evidence that mucosal biofilms form in an experimental model of otitis media and suggest that biofilm formation may be an important factor in the pathogenesis of chronic Otitis media with effusion.
Journal ArticleDOI
Proceedings of the 16th Annual UT-KBRIN Bioinformatics Summit 2016: bioinformatics
Eric C. Rouchka,Julia H. Chariker,David Tieri,Juw Won Park,Shreedharkumar D. Rajurkar,Vikas Singh,Nishchal K. Verma,Yan Cui,Mark L. Farman,Bradford Condon,Bradford Condon,Neil Moore,Jerzy W. Jaromczyk,Jolanta Jaromczyk,Daniel R. Harris,Patrick J. Calie,Eun Kyong Shin,Robert L. Davis,Arash Shaban-Nejad,Joshua M. Mitchell,Robert M. Flight,Qing Jun Wang,Richard M. Higashi,Teresa W.-M. Fan,Andrew N. Lane,Hunter N. B. Moseley,Liangqun Lu,Bernie J. Daigle,Xi Chen,Andrey Smelter,J. Jaromczyk,Li Chen,Bailey K. Phan,Nathaniel J. Serpico,Ethan G. Toney,Caroline E. Melton,Jennifer R. Mandel,Hao Chen,Kazi I. Zaman,Ramin Homayouni,Patrick J Trainor,Samantha M. Carlisle,Andrew P. DeFilippis,Shesh N. Rai +43 more
TL;DR: This work presents a state-of-the-art online version of the KBRIN Bioinformatics Core that automates the very labor-intensive and therefore time-heavy and expensive and therefore expensive and expensive process of manually cataloging data in the data store.
Journal ArticleDOI
Independent component analysis: Mining microarray data for fundamental human gene expression modules
TL;DR: The mechanism of the preclinical anti-cancer drug parthenolide (PTL) is investigated by analyzing the differential expression of the fundamental components of the authors' fundamental components by using independent component analysis (ICA).
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Stochastic Simulation Service: Bridging the Gap between the Computational Expert and the Biologist.
Brian Drawert,Andreas Hellander,Benjamin B. Bales,Debjani Banerjee,Giovanni Bellesia,Bernie J. Daigle,Geoffrey Douglas,Mengyuan Gu,Anand Gupta,Stefan Hellander,Christopher B. Horuk,Dibyendu Nath,Aviral Takkar,Sheng Wu,Per Lötstedt,Chandra Krintz,Linda R. Petzold +16 more
TL;DR: StochSS is presented, an integrated development environment for modeling and simulation of both deterministic and discrete stochastic biochemical systems in up to three dimensions and can seamlessly scale computing resources in the cloud.
Journal ArticleDOI
Multi-omic biomarker identification and validation for diagnosing warzone-related post-traumatic stress disorder
Kelsey R. Dean,Rasha Hammamieh,Synthia H. Mellon,Duna Abu-Amara,Janine D. Flory,Janine D. Flory,Guia Guffanti,Kai Wang,Bernie J. Daigle,Aarti Gautam,Inyoul Lee,Ruoting Yang,Lynn M. Almli,F. Saverio Bersani,F. Saverio Bersani,Nabarun Chakraborty,Duncan E. Donohue,Kimberly Kerley,Taek Kyun Kim,Eugene M. Laska,Min Young Lee,Daniel Lindqvist,Daniel Lindqvist,Adriana Lori,Liangqun Lu,Burook Misganaw,Seid Muhie,Jennifer Newman,Nathan D. Price,Shizhen Qin,Victor I. Reus,Carole Siegel,Pramod R. Somvanshi,Gunjan S. Thakur,Yong Zhou,Leroy Hood,Kerry J. Ressler,Owen M. Wolkowitz,Rachel Yehuda,Rachel Yehuda,Marti Jett,Francis J. Doyle,Charles R. Marmar +42 more
TL;DR: The identification and validation of this diverse diagnostic panel represents a powerful and novel approach to improve accuracy and reduce bias in diagnosing combat-related PTSD.