C
Carol L. Thompson
Researcher at Allen Institute for Brain Science
Publications - 52
Citations - 9636
Carol L. Thompson is an academic researcher from Allen Institute for Brain Science. The author has contributed to research in topics: Cryptochrome & Circadian rhythm. The author has an hindex of 27, co-authored 47 publications receiving 7986 citations. Previous affiliations of Carol L. Thompson include National Institutes of Health & Allen Institute for Artificial Intelligence.
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Journal ArticleDOI
Genome-wide atlas of gene expression in the adult mouse brain
Ed S. Lein,Michael Hawrylycz,Nancy Ao,Mikael Ayres,Amy Bensinger,Amy Bernard,Andrew F. Boe,Mark S. Boguski,Mark S. Boguski,Kevin S. Brockway,Emi J. Byrnes,Lin Chen,Li Chen,Tsuey-Ming Chen,Mei Chi Chin,Jimmy Chong,Brian E. Crook,Aneta Czaplinska,Chinh Dang,Suvro Datta,Nick Dee,Aimee L. Desaki,Tsega Desta,Ellen Diep,Tim A. Dolbeare,Matthew J. Donelan,Hong-Wei Dong,Jennifer G. Dougherty,Ben J. Duncan,Amanda Ebbert,Gregor Eichele,Lili K. Estin,Casey Faber,Benjamin A.C. Facer,Rick Fields,Shanna R. Fischer,Tim P. Fliss,Cliff Frensley,Sabrina N. Gates,Katie J. Glattfelder,Kevin R. Halverson,Matthew R. Hart,John G. Hohmann,Maureen P. Howell,Darren P. Jeung,Rebecca A. Johnson,Patrick T. Karr,Reena Kawal,Jolene Kidney,Rachel H. Knapik,Chihchau L. Kuan,James H. Lake,Annabel R. Laramee,Kirk D. Larsen,Christopher Lau,Tracy Lemon,Agnes J. Liang,Ying Liu,Lon T. Luong,Jesse Michaels,Judith J. Morgan,Rebecca J. Morgan,Marty Mortrud,Nerick Mosqueda,Lydia Ng,Randy Ng,Geralyn J. Orta,Caroline C. Overly,Tu H. Pak,Sheana Parry,Sayan Dev Pathak,Owen C. Pearson,Ralph B. Puchalski,Zackery L. Riley,Hannah R. Rockett,Stephen A. Rowland,Joshua J. Royall,Marcos J. Ruiz,Nadia R. Sarno,Katherine Schaffnit,Nadiya V. Shapovalova,Taz Sivisay,Clifford R. Slaughterbeck,Simon Smith,Kimberly A. Smith,Bryan I. Smith,Andy J. Sodt,Nick N. Stewart,Kenda-Ruth Stumpf,Susan M. Sunkin,Madhavi Sutram,Angelene Tam,Carey D. Teemer,Christina Thaller,Carol L. Thompson,Lee R. Varnam,Axel Visel,Axel Visel,Ray M. Whitlock,Paul Wohnoutka,Crissa K. Wolkey,Victoria Y. Wong,Matthew J.A. Wood,Murat B. Yaylaoglu,Rob Young,Brian L. Youngstrom,Xu Feng Yuan,Bin Zhang,Theresa A. Zwingman,Allan R. Jones +109 more
TL;DR: An anatomically comprehensive digital atlas containing the expression patterns of ∼20,000 genes in the adult mouse brain is described, providing an open, primary data resource for a wide variety of further studies concerning brain organization and function.
Journal ArticleDOI
Differential regulation of mammalian period genes and circadian rhythmicity by cryptochromes 1 and 2.
Martha Hotz Vitaterna,Christopher P. Selby,Takeshi Todo,Hitoshi Niwa,Carol L. Thompson,Ethan M. Fruechte,Kenichi Hitomi,Randy J. Thresher,Tomoko Ishikawa,Jun-ichi Miyazaki,Joseph S. Takahashi,Aziz Sancar +11 more
TL;DR: It is demonstrated that Cry1 and Cry2 are required for the normal expression of circadian behavioral rhythms, as well as circadian rhythms of mPer1 and mPer2 in the SCN.
Journal ArticleDOI
Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system
Susan M. Sunkin,Lydia Ng,Christopher Lau,Tim A. Dolbeare,Terri L. Gilbert,Carol L. Thompson,Michael Hawrylycz,Chinh Dang +7 more
TL;DR: The resources available at the Allen Brain Atlas are reviewed, describing each product and data type [such as in situ hybridization (ISH) and supporting histology, microarray, RNA sequencing, reference atlases, projection mapping and magnetic resonance imaging].
Journal ArticleDOI
Genomic anatomy of the hippocampus.
Carol L. Thompson,Sayan Dev Pathak,Andreas Jeromin,Lydia Ng,Cameron Ross MacPherson,Marty Mortrud,Allison Cusick,Zackery L. Riley,Susan M. Sunkin,Amy Bernard,Ralph B. Puchalski,Fred H. Gage,Allan R. Jones,Vladimir B. Bajic,Michael Hawrylycz,Ed S. Lein +15 more
TL;DR: Application of unbiased statistical component analyses to genome-scale hippocampal gene expression data revealed robust septotemporal molecular heterogeneity, leading to the identification of a large cohort of genes with robust regionalized hippocampal expression.
Journal ArticleDOI
A high resolution spatiotemporal atlas of gene expression of the developing mouse brain
Carol L. Thompson,Lydia Ng,Vilas Menon,Salvador Martinez,Salvador Martinez,Changkyu Lee,Katie J. Glattfelder,Susan M. Sunkin,Alex M. Henry,Christopher Lau,Chinh Dang,Raquel Garcia-Lopez,Almudena Martinez-Ferre,Ana Pombero,John L.R. Rubenstein,Wayne Wakeman,John G. Hohmann,Nick Dee,Andrew Sodt,R.D. Young,Kimberly A. Smith,Thuc Nghi Nguyen,Jolene Kidney,Leonard Kuan,Andreas Jeromin,Ajamete Kaykas,Jeremy A. Miller,Damon T. Page,Geri Orta,Amy Bernard,Zackery L. Riley,Simon Smith,Paul Wohnoutka,Michael Hawrylycz,Luis Puelles,Allan R. Jones +35 more
TL;DR: In situ hybridization data for embryonic and postnatal mouse brain at seven developmental stages for ∼2,100 genes provided a transcription factor code that discriminates brain structures and identifies the developmental age of a tissue, providing a foundation for eventual genetic manipulation or tracking of specific brain structures over development.