E
Ewa Szczurek
Researcher at University of Warsaw
Publications - 69
Citations - 1866
Ewa Szczurek is an academic researcher from University of Warsaw. The author has contributed to research in topics: Biology & Cancer. The author has an hindex of 16, co-authored 52 publications receiving 1094 citations. Previous affiliations of Ewa Szczurek include Swiss Institute of Bioinformatics & Max Planck Society.
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Journal ArticleDOI
Eleven grand challenges in single-cell data science
David Lähnemann,David Lähnemann,Johannes Köster,Johannes Köster,Ewa Szczurek,Davis J. McCarthy,Davis J. McCarthy,Stephanie C. Hicks,Mark D. Robinson,Catalina A. Vallejos,Catalina A. Vallejos,Kieran R Campbell,Kieran R Campbell,Niko Beerenwinkel,Niko Beerenwinkel,Ahmed Mahfouz,Ahmed Mahfouz,Luca Pinello,Luca Pinello,Pavel Skums,Alexandros Stamatakis,Alexandros Stamatakis,Camille Stephan Otto Attolini,Samuel Aparicio,Samuel Aparicio,Jasmijn A. Baaijens,Marleen Balvert,Marleen Balvert,Buys de Barbanson,Antonio Cappuccio,Giacomo Corleone,Bas E. Dutilh,Bas E. Dutilh,Maria Florescu,Victor Guryev,Rens Holmer,Katharina Jahn,Katharina Jahn,Thamar Jessurun Lobo,Emma M. Keizer,Indu Khatri,Szymon M. Kielbasa,Jan O. Korbel,Alexey M. Kozlov,Tzu Hao Kuo,Boudewijn P. F. Lelieveldt,Boudewijn P. F. Lelieveldt,Ion I. Mandoiu,John C. Marioni,John C. Marioni,John C. Marioni,Tobias Marschall,Tobias Marschall,Felix Mölder,Amir Niknejad,Lukasz Raczkowski,Marcel J. T. Reinders,Marcel J. T. Reinders,Jeroen de Ridder,Antoine-Emmanuel Saliba,Antonios Somarakis,Oliver Stegle,Oliver Stegle,Fabian J. Theis,Huan Yang,Alexander Zelikovsky,Alexander Zelikovsky,Alice C. McHardy,Benjamin J. Raphael,Sohrab P. Shah,Alexander Schönhuth,Alexander Schönhuth +71 more
TL;DR: This compendium is for established researchers, newcomers, and students alike, highlighting interesting and rewarding problems for the coming years in single-cell data science.
Journal ArticleDOI
An action plan for pan-European defence against new SARS-CoV-2 variants.
Viola Priesemann,Rudi Balling,Melanie M. Brinkmann,Sandra Ciesek,Thomas Czypionka,Isabella Eckerle,Giulia Giordano,Claudia Hanson,Zdenek Hel,Pirta Hotulainen,Peter Klimek,Armin Nassehi,Andreas Peichl,Matjaz Perc,Elena Petelos,Barbara Prainsack,Ewa Szczurek +16 more
Book ChapterDOI
Modeling Mutual Exclusivity of Cancer Mutations
Ewa Szczurek,Niko Beerenwinkel +1 more
TL;DR: A de novo approach is taken to search for mutually exclusive patterns in cancer genomic data, where these alterations tend not to occur together in the same patient.
Journal ArticleDOI
ARA: accurate, reliable and active histopathological image classification framework with Bayesian deep learning
TL;DR: This work proposes an accurate, reliable and active (ARA) image classification framework and introduces a new Bayesian Convolutional Neural Network (ARA-CNN) for classifying histopathological images of colorectal cancer, which achieves exceptional classification accuracy, outperforming other models trained on the same dataset.
Journal Article
Modeling Mutual Exclusivity of Cancer Mutations
TL;DR: A fully probabilistic, generative model of mutual exclusivity is developed, explicitly taking coverage, impurity, as well as error rates into account, and several significant patterns that are biologically relevant are identified, most of which would not be detected by previous approaches.