J
Jeremy Peterson
Researcher at J. Craig Venter Institute
Publications - 35
Citations - 37923
Jeremy Peterson is an academic researcher from J. Craig Venter Institute. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 34, co-authored 35 publications receiving 36303 citations. Previous affiliations of Jeremy Peterson include TigerLogic.
Papers
More filters
Journal ArticleDOI
Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
Karen E. Nelson,Christian Weinel,Ian T. Paulsen,Robert J. Dodson,H. Hilbert,V. A. P. Martins Dos Santos,Derrick E. Fouts,Steven R. Gill,Mihai Pop,Mark A. Holmes,Lauren M. Brinkac,Maureen J. Beanan,Robert T. DeBoy,Sean C. Daugherty,James F. Kolonay,Ramana Madupu,William C. Nelson,Owen White,Jeremy Peterson,Hoda Khouri,Ioana R. Hance,P. Chris Lee,Erik Holtzapple,David J. Scanlan,Kevin Tran,A. Moazzez,T. Utterback,M. Rizzo,K. Lee,Daniel S. Kosack,D. Moestl,H. Wedler,J. Lauber,Diana Stjepandic,Jörg D. Hoheisel,M. Straetz,Sabina Heim,C. Kiewitz,Jonathan A. Eisen,Kenneth N. Timmis,A. Düsterhöft,Burkhard Tümmler,Claire M. Fraser +42 more
TL;DR: Pseudomonas putida is a metabolically versatile saprophytic soil bacterium that has been certified as a biosafety host for the cloning of foreign genes.
Journal ArticleDOI
Complete Genome Sequence of Neisseria meningitidis Serogroup B Strain MC58
Hervé Tettelin,Nigel J. Saunders,John F. Heidelberg,Alex C. Jeffries,Karen E. Nelson,Jonathan A. Eisen,Karen A. Ketchum,Derek W. Hood,John F. Peden,Robert J. Dodson,William C. Nelson,Michelle L. Gwinn,Robert T. DeBoy,Jeremy Peterson,Erin Hickey,Daniel H. Haft,Steven L. Salzberg,Owen White,Robert D. Fleischmann,Brian Dougherty,Tanya Mason,Anne Ciecko,Debbie S. Parksey,Eric Blair,Henry Cittone,Emily B. Clark,Matthew D. Cotton,T. Utterback,Hoda Khouri,Haiying Qin,Jessica Vamathevan,John Gill,Vincenzo Scarlato,Vega Masignani,Mariagrazia Pizza,Guido Grandi,Li Sun,Hamilton O. Smith,Claire M. Fraser,E. Richard Moxon,Rino Rappuoli,J. Craig Venter +41 more
TL;DR: Neisseria meningitidis contains more genes that undergo phase variation than any pathogen studied to date, a mechanism that controls their expression and contributes to the evasion of the host immune system.
Journal ArticleDOI
Complete Genome Sequence of Treponema pallidum, the Syphilis Spirochete
Claire M. Fraser,Steven J. Norris,George M. Weinstock,Owen White,Granger G. Sutton,Robert J. Dodson,Michelle L. Gwinn,Erin Hickey,Rebecca A. Clayton,Karen A. Ketchum,Erica Sodergren,John M. Hardham,Michael P. McLeod,Steven L. Salzberg,Jeremy Peterson,Hanif Khalak,Delwood Richardson,Jerrilyn K. Howell,Monjula Chidambaram,Teresa Utterback,Lisa McDonald,Patricia Artiach,Cheryl Bowman,Matthew D. Cotton,Claire Fujii,Stacey Garland,Bonnie Hatch,Kurt Horst,Kevin Roberts,Mina Sandusky,Janice Weidman,Hamilton O. Smith,J. Craig Venter +32 more
TL;DR: Comparison of the T. pallidum genome sequence with that of another pathogenic spirochete, Borrelia burgdorferi, the agent of Lyme disease, identified unique and common genes and substantiates the considerable diversity observed among pathogenicSpirochetes.
Journal ArticleDOI
Alignment of whole genomes
Arthur L. Delcher,Simon Kasif,Robert D. Fleischmann,Jeremy Peterson,Owen White,Steven L. Salzberg +5 more
TL;DR: Using an efficient data structure called a suffix tree, the system is able to rapidly align sequences containing millions of nucleotides and should facilitate analysis of syntenic chromosomal regions, strain-to-strain comparisons, evolutionary comparisons and genomic duplications.
Journal ArticleDOI
Genome sequence of the radioresistant bacterium Deinococcus radiodurans R1.
Owen White,Jonathan A. Eisen,John F. Heidelberg,Erin Hickey,Jeremy Peterson,Robert J. Dodson,Daniel H. Haft,Michelle L. Gwinn,William C. Nelson,Delwood Richardson,Kelly Moffat,Haiying Qin,Lingxia Jiang,W. Pamphile,M. Crosby,Mian Shen,Jessica Vamathevan,P. Lam,Lisa McDonald,T. Utterback,C. Zalewski,Kira S. Makarova,L. Aravind,Michael J. Daly,Kenneth W. Minton,Robert D. Fleischmann,K. A. Ketchum,Karen E. Nelson,Steven L. Salzberg,Hamilton O. Smith,J C Venter,J C Venter,Claire M. Fraser +32 more
TL;DR: Deinococcus radiodurans represents an organism in which all systems for DNA repair, DNA damage export, desiccation and starvation recovery, and genetic redundancy are present in one cell.