J
Jianmin Fu
Researcher at University of Texas Health Science Center at San Antonio
Publications - 25
Citations - 1664
Jianmin Fu is an academic researcher from University of Texas Health Science Center at San Antonio. The author has contributed to research in topics: Gene & Cryptococcus neoformans. The author has an hindex of 14, co-authored 23 publications receiving 1525 citations. Previous affiliations of Jianmin Fu include University of Texas at Austin & University of Texas at San Antonio.
Papers
More filters
Journal ArticleDOI
The Genome of the Basidiomycetous Yeast and Human Pathogen Cryptococcus Neoformans
Brendan J. Loftus,Eula Fung,Paola Roncaglia,Don Rowley,Paolo Amedeo,Dan Bruno,Jessica Vamathevan,Molly Miranda,Iain J. Anderson,James A. Fraser,Jonathan E. Allen,Ian Bosdet,Michael R. Brent,Readman Chiu,Tamara L. Doering,Maureen J. Donlin,Cletus D'Souza,Deborah S. Fox,Deborah S. Fox,Viktoriya Grinberg,Jianmin Fu,Marilyn Fukushima,Brian J. Haas,James Huang,Guilhem Janbon,Steven J.M. Jones,Hean L. Koo,Martin Krzywinski,June Kwon-Chung,Klaus B. Lengeler,Klaus B. Lengeler,Rama Maiti,Marco A. Marra,Robert E. Marra,Robert E. Marra,Carrie Mathewson,Thomas G. Mitchell,Mihaela Pertea,Florenta R. Riggs,Steven L. Salzberg,Jacqueline E. Schein,Alla Shvartsbeyn,Heesun Shin,Martin Shumway,Charles A. Specht,Bernard B. Suh,Aaron Tenney,T. Utterback,Brian L. Wickes,Jennifer R. Wortman,Natasja Wye,James W. Kronstad,Jennifer K. Lodge,Joseph Heitman,Ronald W. Davis,Claire M. Fraser,Richard W. Hyman +56 more
TL;DR: Comparison of two phenotypically distinct strains reveals variation in gene content in addition to sequence polymorphisms between the genomes, and the genome is rich in transposons, many of which cluster at candidate centromeric regions.
Journal ArticleDOI
Genomic Analysis of the Basal Lineage Fungus Rhizopus oryzae Reveals a Whole-Genome Duplication
Li-Jun Ma,Ashraf S. Ibrahim,Christopher D. Skory,Manfred Grabherr,Gertraud Burger,Margi I. Butler,Marek Eliáš,Alexander Idnurm,B. Franz Lang,Teruo Sone,Ayumi Abe,Sarah E. Calvo,Luis M. Corrochano,Reinhard Engels,Jianmin Fu,Wilhelm Hansberg,Jung Mi Kim,Chinnappa D. Kodira,Michael Koehrsen,Bo Liu,Diego Miranda-Saavedra,Sinéad B. O'Leary,Lucila Ortiz-Castellanos,Russell T. M. Poulter,Julio Rodríguez-Romero,José Ruiz-Herrera,Yao Qing Shen,Qiandong Zeng,James E. Galagan,Bruce W. Birren,Christina A. Cuomo,Brian L. Wickes +31 more
TL;DR: The order and genomic arrangement of the duplicated gene pairs and their common phylogenetic origin provide evidence for an ancestral whole-genome duplication (WGD) event that resulted in the expansion of multiple gene families related to cell growth and signal transduction, as well as secreted aspartic protease and subtilase protein families, which are known fungal virulence factors.
Journal ArticleDOI
Molecular Epidemiology of Clinical Cryptococcus neoformans Strains from India
N. Jain,Brian L. Wickes,S. M. Keller,Jianmin Fu,Arturo Casadevall,Paras Jain,Mark A. Ragan,Uma Banerjee,Bettina C. Fries +8 more
TL;DR: Differences in genetic diversity of C. neoformans isolates from India compared to isolate from other regions in the world are demonstrated and it is demonstrated that DNA typing with the TCN-1 probe can adequately distinguish C.Neoformans var.
Journal ArticleDOI
Split marker transformation increases homologous integration frequency in Cryptococcus neoformans.
TL;DR: The effectiveness of the split marker disruption strategy suggests that continued investigation and modification of traditional molecular techniques could increase the efficiency of C. neoformans molecular manipulation.
Journal ArticleDOI
The DEAD-box RNA helicase Vad1 regulates multiple virulence-associated genes in Cryptococcus neoformans
John C. Panepinto,Lide Liu,Jeanie Ramos,Xudong Zhu,Tibor Valyi-Nagy,Saliha Eksi,Jianmin Fu,H. Ari Jaffe,Brian L. Wickes,Peter R. Williamson,Peter R. Williamson +10 more
TL;DR: Data show that fungal virulence-associated genes are coordinately regulated and that an analysis of such transcriptomes allows for the identification of important new genes involved in the normal growth and virulence of fungal pathogens.