K
Karthik Urs
Researcher at University of Michigan
Publications - 15
Citations - 1164
Karthik Urs is an academic researcher from University of Michigan. The author has contributed to research in topics: Biology & Microbiome. The author has an hindex of 7, co-authored 9 publications receiving 880 citations.
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Journal ArticleDOI
A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes
Johan Larsbrink,Theresa E. Rogers,Glyn R. Hemsworth,Lauren S. McKee,Alexandra S. Tauzin,Oliver Spadiut,Stefan Klinter,Nicholas A. Pudlo,Karthik Urs,Nicole M. Koropatkin,A. Louise Creagh,Charles A. Haynes,Amelia G. Kelly,Stefan Nilsson Cederholm,Gideon J. Davies,Eric C. Martens,Harry Brumer +16 more
TL;DR: It is demonstrated that a single, complex gene locus in Bacteroides ovatus confers XyG catabolism in this common colonic symbiont, and the metabolism of even highly abundant components of dietary fibre may be mediated by niche species.
Journal ArticleDOI
Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism
Fiona Cuskin,Fiona Cuskin,Elisabeth C. Lowe,Max J. Temple,Yanping Zhu,Yanping Zhu,Elizabeth A. Cameron,Nicholas A. Pudlo,Nathan T. Porter,Karthik Urs,Andrew J. Thompson,Alan Cartmell,Artur Rogowski,Brian S. Hamilton,Rui Chen,Thomas J. Tolbert,Kathleen Piens,Debby Bracke,Wouter Vervecken,Z. Hakki,Gaetano Speciale,Jose L. Munōz-Munōz,Andrew T. Day,Maria J. Peña,Richard McLean,Michael D. L. Suits,Alisdair B. Boraston,Todd Atherly,Cherie J. Ziemer,Spencer J. Williams,Gideon J. Davies,D. Wade Abbott,D. Wade Abbott,Eric C. Martens,Harry J. Gilbert,Harry J. Gilbert +35 more
TL;DR: Genomic comparison with B. thetaiotaomicron in conjunction with cell culture studies show that a cohort of highly successful members of the microbiota has evolved to consume sterically-restricted yeast glycans, an adaptation that may reflect the incorporation of eukaryotic microorganisms into the human diet.
Journal ArticleDOI
Symbiotic Human Gut Bacteria with Variable Metabolic Priorities for Host Mucosal Glycans
Nicholas A. Pudlo,Karthik Urs,Supriya Suresh Kumar,J. Bruce German,David A. Mills,Eric C. Martens +5 more
TL;DR: Investigating the responses of Bacteroides thetaiotaomicron, a common human intestinal bacterium that metabolizes more than a dozen different polysaccharides, reveals new aspects of how individual bacteria partition to “preferred niches” in the complex gut ecosystem, which has important and immediate implications for understanding and predicting the behavioral dynamics of this community.
Journal ArticleDOI
Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides
K. Tamura,Glyn R. Hemsworth,Guillaume Déjean,Theresa E. Rogers,Nicholas A. Pudlo,Karthik Urs,Namrata Jain,Gideon J. Davies,Eric C. Martens,Harry Brumer +9 more
TL;DR: Molecular insight is provided into the function of an archetypal MLG utilization locus (MLGUL) through a combination of biochemistry, enzymology, structural biology, and microbiology that underscores the importance of gut microbial metabolism of MLG as a common cereal polysaccharide.
Journal ArticleDOI
Corrigendum: Human gut Bacteroidetes can utilize yeast mannan through a selfish mechanism
Fiona Cuskin,Elisabeth C. Lowe,Max J. Temple,Yanping Zhu,Elizabeth A. Cameron,Nicholas A. Pudlo,Nathan T. Porter,Karthik Urs,Andrew J. Thompson,Alan Cartmell,Artur Rogowski,B. Hamilton,Rui Chen,Thomas J. Tolbert,Kathleen Piens,Debby Bracke,Wouter Vervecken,Z. Hakki,Gaetano Speciale,Jose L. Munōz-Munōz,Andrew T. Day,Maria J. Peña,Richard McLean,Michael D. L. Suits,Alisdair B. Boraston,Todd Atherly,Cherie J. Ziemer,Spencer J. Williams,Gideon J. Davies,D. Wade Abbott,Eric C. Martens,Harry J. Gilbert +31 more
TL;DR: This corrects the article to show that the method used to derive the H2O2 “spatially aggregating force” is based on a two-step process, not a single step, like in the previous version of this paper.