K
Kirk J. Grubbs
Researcher at University of Wisconsin-Madison
Publications - 11
Citations - 1148
Kirk J. Grubbs is an academic researcher from University of Wisconsin-Madison. The author has contributed to research in topics: Genome & Phylotype. The author has an hindex of 8, co-authored 11 publications receiving 972 citations. Previous affiliations of Kirk J. Grubbs include University of North Carolina at Chapel Hill & Arizona State University.
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Journal ArticleDOI
Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile).
Christopher D. Smith,Aleksey V. Zimin,Carson Holt,Ehab Abouheif,Richard Benton,Elizabeth Cash,Vincent Croset,Cameron R. Currie,Eran Elhaik,Christine G. Elsik,Marie-Julie Favé,Vilaiwan M. Fernandes,Juergen Gadau,Joshua D. Gibson,Dan Graur,Kirk J. Grubbs,Darren E. Hagen,Martin Helmkampf,Jo Anne Holley,Hao Hu,Ana Sofia Ibarraran Viniegra,Brian R. Johnson,Reed M. Johnson,Abderrahman Khila,Jay W. Kim,Joseph G. Laird,Kaitlyn A. Mathis,Joseph A. Moeller,Monica Munoz-Torres,Marguerite C. Murphy,Rin Nakamura,Surabhi Nigam,Rick P. Overson,Jennifer E. Placek,Rajendhran Rajakumar,Justin T. Reese,Hugh M. Robertson,Chris Smith,Andrew V. Suarez,Garret Suen,Elissa L. Suhr,Shu Tao,Candice W. Torres,Ellen van Wilgenburg,Lumi Viljakainen,Kimberly K. O. Walden,Alexander L. Wild,Mark Yandell,James A. Yorke,Neil D. Tsutsui +49 more
TL;DR: The draft genome sequence of a particularly widespread and well-studied species, the invasive Argentine ant, is reported, which was accomplished using a combination of 454 and Illumina sequencing and community-based funding rather than federal grant support.
Journal ArticleDOI
Draft genome of the red harvester ant Pogonomyrmex barbatus
Chris Smith,Christopher D. Smith,Hugh M. Robertson,Martin Helmkampf,Aleksey V. Zimin,Mark Yandell,Carson Holt,Hao Hu,Ehab Abouheif,Richard Benton,Elizabeth Cash,Vincent Croset,Cameron R. Currie,Eran Elhaik,Christine G. Elsik,Marie-Julie Favé,Vilaiwan M. Fernandes,Joshua D. Gibson,Dan Graur,Wulfila Gronenberg,Kirk J. Grubbs,Darren E. Hagen,Ana Sofia Ibarraran Viniegra,Brian R. Johnson,Reed M. Johnson,Abderrahman Khila,Jay W. Kim,Kaitlyn A. Mathis,Monica Munoz-Torres,Marguerite C. Murphy,Julie A. Mustard,Rin Nakamura,Oliver Niehuis,Surabhi Nigam,Rick P. Overson,Jennifer E. Placek,Rajendhran Rajakumar,Justin T. Reese,Garret Suen,Shu Tao,Candice W. Torres,Neil D. Tsutsui,Lumi Viljakainen,Florian Wolschin,Jürgen Gadau +44 more
TL;DR: Gene networks involved in generating key differences between the queen and worker castes show signatures of increased methylation and suggest that ants and bees may have independently co-opted the same gene regulatory mechanisms for reproductive division of labor.
Journal ArticleDOI
The genome sequence of the leaf-cutter ant Atta cephalotes reveals insights into its obligate symbiotic lifestyle
Garret Suen,Garret Suen,Clotilde Teiling,Lewyn Li,Carson Holt,Ehab Abouheif,Erich Bornberg-Bauer,Pascal Bouffard,Eric J. Caldera,Elizabeth Cash,Amy Cavanaugh,Amy Cavanaugh,Olgert Denas,Eran Elhaik,Marie-Julie Favé,Jürgen Gadau,Joshua D. Gibson,Dan Graur,Kirk J. Grubbs,Darren E. Hagen,Timothy T. Harkins,Martin Helmkampf,Hao Hu,Brian R. Johnson,Jay W. Kim,Sarah E. Marsh,Joseph A. Moeller,Joseph A. Moeller,Monica Munoz-Torres,Marguerite C. Murphy,Meredith C. Naughton,Surabhi Nigam,Rick P. Overson,Rajendhran Rajakumar,Justin T. Reese,Jarrod J. Scott,Jarrod J. Scott,Jarrod J. Scott,Chris Smith,Shu Tao,Neil D. Tsutsui,Lumi Viljakainen,Lothar Wissler,Mark Yandell,Fabian Zimmer,R. James Taylor,Steven C. Slater,Steven C. Slater,Sandra W. Clifton,Wesley C. Warren,Christine G. Elsik,Christopher D. Smith,George M. Weinstock,Nicole M. Gerardo,Cameron R. Currie,Cameron R. Currie,Cameron R. Currie +56 more
TL;DR: Following recent reports of genome sequences from other insects that engage in symbioses with beneficial microbes, the A. cephalotes genome provides new insights into the symbiotic lifestyle of this ant and advances the understanding of host–microbe symbioss.
Journal ArticleDOI
The antimicrobial potential of Streptomyces from insect microbiomes
Marc G. Chevrette,Caitlin M Carlson,Humberto E. Ortega,Chris S. Thomas,Gene E. Ananiev,Kenneth J. Barns,Adam J. Book,Julian Cagnazzo,Camila Carlos,Will Flanigan,Kirk J. Grubbs,Heidi A. Horn,F. Michael Hoffmann,Jonathan L. Klassen,Jennifer J. Knack,Gina R. Lewin,Bradon R. McDonald,Laura K. Muller,Weilan G. P. Melo,Adrián A. Pinto-Tomás,Amber Schmitz,Evelyn Wendt-Pienkowski,Scott A. Wildman,Miao Zhao,Fan Zhang,Tim S. Bugni,David R. Andes,Mônica Tallarico Pupo,Cameron R. Currie +28 more
TL;DR: The antimicrobial potential of insect-associated Streptomyces is uncovered and a compound, cyphomycin, active against multidrug-resistant fungal pathogens is identified, indicating host microbiomes are feasible sources for drug discovery.
Journal ArticleDOI
Large-Scale Bioinformatics Analysis of Bacillus Genomes Uncovers Conserved Roles of Natural Products in Bacterial Physiology
Kirk J. Grubbs,Rachel M. Bleich,Kevin C. Santa Maria,Scott E. Allen,Sherif Farag,AgBiome Team,Elizabeth A. Shank,Albert A. Bowers +7 more
TL;DR: The majority of Bacilli natural products are comprised of a small set of highly conserved, well-distributed, known natural product compounds, most of these metabolites have important roles influencing the physiology and development of Bacillus species.