M
Marcus Daniels
Researcher at Los Alamos National Laboratory
Publications - 25
Citations - 2881
Marcus Daniels is an academic researcher from Los Alamos National Laboratory. The author has contributed to research in topics: Virus & Human leukocyte antigen. The author has an hindex of 20, co-authored 25 publications receiving 2718 citations.
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Journal ArticleDOI
Tiered categorization of a diverse panel of HIV-1 Env pseudoviruses for assessment of neutralizing antibodies.
Michael S. Seaman,Holly Janes,Natalie Hawkins,Lauren E. Grandpre,Colleen Devoy,Ayush Giri,Rory Coffey,Linda Harris,Blake Wood,Marcus Daniels,Tanmoy Bhattacharya,Alan Lapedes,Victoria R. Polonis,Francine E. McCutchan,Peter B. Gilbert,Steve Self,Bette T. Korber,David C. Montefiori,John R. Mascola +18 more
TL;DR: These data provide the first systematic assessment of the overall neutralization sensitivities of a genetically and geographically diverse panel of circulating HIV-1 strains and can facilitate the systematic characterization of NAb responses elicited by candidate vaccine immunogens.
Journal ArticleDOI
Breadth of Human Immunodeficiency Virus-Specific Neutralizing Activity in Sera: Clustering Analysis and Association with Clinical Variables
Nicole A. Doria-Rose,Rachel M. Klein,Marcus Daniels,Sijy O'Dell,Martha Nason,Alan Lapedes,Tanmoy Bhattacharya,Tanmoy Bhattacharya,Stephen A. Migueles,Richard T. Wyatt,Bette T. Korber,Bette T. Korber,John R. Mascola,Mark Connors +13 more
TL;DR: Breadth of neutralization was correlated with viral load, but not with CD4 count, history of past antiretroviral use, age, gender, race/ethnicity, or route of exposure.
Journal ArticleDOI
Founder effects in the assessment of HIV polymorphisms and HLA allele associations.
Tanmoy Bhattacharya,Tanmoy Bhattacharya,Marcus Daniels,David Heckerman,Brian T. Foley,Nicole Frahm,Carl M. Kadie,Jonathan M. Carlson,Jonathan M. Carlson,Karina Yusim,Ben H. McMahon,Brian Gaschen,Simon Mallal,James I. Mullins,David C. Nickle,Joshua T. Herbeck,Christine Rousseau,Gerald H. Learn,Toshiyuki Miura,Christian Brander,Bruce D. Walker,Bruce D. Walker,Bette T. Korber,Bette T. Korber +23 more
TL;DR: It is shown that viral lineage effects rather than immune escape often explain apparent human leukocyte antigen (HLA)–mediated immune-escape mutations defined by older analysis methods.
Journal ArticleDOI
HIV evolution in early infection: selection pressures, patterns of insertion and deletion, and the impact of APOBEC.
Natasha T. Wood,Tanmoy Bhattacharya,Tanmoy Bhattacharya,Brandon F. Keele,Elena E. Giorgi,Elena E. Giorgi,Michael Liu,Brian Gaschen,Marcus Daniels,Guido Ferrari,Barton F. Haynes,Andrew J. McMichael,George M. Shaw,Beatrice H. Hahn,Bette T. Korber,Bette T. Korber,Cathal Seoighe,Cathal Seoighe,Cathal Seoighe +18 more
TL;DR: This work investigates the diversification of HIV-1 env coding sequences in 81 very early B subtype infections previously shown to have resulted from transmission or expansion of single viruses or two closely related viruses, and highlights the role of CTL escape and hypermutation in shaping viral evolution during the establishment of new infections.
Journal ArticleDOI
Evidence of Differential HLA Class I-Mediated Viral Evolution in Functional and Accessory/Regulatory Genes of HIV-1
Zabrina L. Brumme,Zabrina L. Brumme,Zabrina L. Brumme,Chanson J. Brumme,Chanson J. Brumme,David Heckerman,Bette T. Korber,Bette T. Korber,Marcus Daniels,Jonathan M. Carlson,Jonathan M. Carlson,Carl M. Kadie,Tanmoy Bhattacharya,Tanmoy Bhattacharya,Celia Chui,James J. Szinger,Theresa Mo,Robert S. Hogg,Robert S. Hogg,Julio S. G. Montaner,Nicole Frahm,Christian Brander,Bruce D. Walker,Bruce D. Walker,P. Richard Harrigan +24 more
TL;DR: The relationship between HLA class I-associated polymorphisms and lower CD4+ cell count suggests that immune escape correlates with disease status, supporting an essential role of maintenance of effective CTL responses in immune control of HIV-1.