M
Meganathan P. Ramakodi
Researcher at Mississippi State University
Publications - 6
Citations - 411
Meganathan P. Ramakodi is an academic researcher from Mississippi State University. The author has contributed to research in topics: Biology & Genome. The author has an hindex of 3, co-authored 3 publications receiving 362 citations.
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Journal ArticleDOI
Three crocodilian genomes reveal ancestral patterns of evolution among archosaurs
Richard E. Green,Edward L. Braun,Joel Armstrong,Dent Earl,Ngan Nguyen,Glenn Hickey,Michael W. Vandewege,John St. John,Salvador Capella-Gutierrez,Todd A. Castoe,Todd A. Castoe,Colin Kern,Matthew K. Fujita,Juan C. Opazo,Jerzy Jurka,Kenji K. Kojima,Juan Caballero,Robert Hubley,Arian F.A. Smit,Roy N. Platt,Christine A. Lavoie,Meganathan P. Ramakodi,John W. Finger,Alexander Suh,Alexander Suh,Sally R. Isberg,Lee G. Miles,Amanda Y. Chong,Weerachai Jaratlerdsiri,Jaime Gongora,Chris Moran,Andrés Iriarte,John E. McCormack,Shane C. Burgess,Scott V. Edwards,Eric Lyons,Christina L. Williams,Matthew Breen,Jason T. Howard,Cathy R. Gresham,Daniel G. Peterson,Juergen Schmitz,David D. Pollock,David Haussler,David Haussler,Eric W. Triplett,Guojie Zhang,Naoki Irie,Erich D. Jarvis,Christopher A. Brochu,Carl J. Schmidt,Fiona M. McCarthy,Brant C. Faircloth,Brant C. Faircloth,Federico G. Hoffmann,Travis C. Glenn,Toni Gabaldón,Toni Gabaldón,Benedict Paten,David A. Ray,David A. Ray +60 more
TL;DR: An exceptionally slow rate of genome evolution within crocodilians at all levels is observed, consistent with a single underlying cause of a reduced rate of evolutionary change rather than intrinsic differences in base repair machinery.
Journal ArticleDOI
Multiple Lineages of Ancient CR1 Retroposons Shaped the Early Genome Evolution of Amniotes
Alexander Suh,Alexander Suh,Gennady Churakov,Meganathan P. Ramakodi,Roy N. Platt,Roy N. Platt,Jerzy Jurka,Kenji K. Kojima,Juan Caballero,Arian F.A. Smit,Kent A. Vliet,Federico G. Hoffmann,Juergen Brosius,Richard E. Green,Edward L. Braun,David A. Ray,David A. Ray,Juergen Schmitz +17 more
TL;DR: This study is the first to analyze CR1 evolution in a genome-wide and amniote-wide context and the data strongly suggest that the ancestral amNIote genome contained myriad CR1 elements from multiple ancient lineages, and remnants of these are still detectable in the relatively stable genomes of crocodilians and turtles.
Journal ArticleDOI
A 454 sequencing approach to dipteran mitochondrial genome research
TL;DR: The utility of 454 sequencing to obtain complete mitochondrial genomes for dipterans without the aid of conventional molecular techniques such as PCR and cloning is illustrated and this method of mtgenome sequencing in arthropods is validated.
Journal ArticleDOI
Influence of 16S rRNA reference databases in amplicon-based environmental microbiome research
TL;DR: In this article , the authors analyzed the amplicon (V1V3, V3V4, V4V5 and V6V8) data of 128 soil samples and evaluated the impact of 16S rRNA databases, Genome Taxonomy Database (GTDB), Ribosomal Database Project (RDP), SILVA and Consensus Taxonomy (ConTax), on microbiome inference.