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Rebecca E. McIntyre
Researcher at Wellcome Trust Sanger Institute
Publications - 30
Citations - 3106
Rebecca E. McIntyre is an academic researcher from Wellcome Trust Sanger Institute. The author has contributed to research in topics: Genome & Inflammatory bowel disease. The author has an hindex of 18, co-authored 26 publications receiving 2638 citations.
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Journal ArticleDOI
Mouse genomic variation and its effect on phenotypes and gene regulation
Thomas M. Keane,Leo Goodstadt,Petr Danecek,Michael A. White,Kim Wong,Binnaz Yalcin,Andreas Heger,Avigail Agam,Avigail Agam,Guy Slater,Martin Goodson,Nick Furlotte,Eleazar Eskin,Christoffer Nellåker,Helen Whitley,James Cleak,Deborah Janowitz,Deborah Janowitz,Polinka Hernandez-Pliego,Andrew Edwards,T G Belgard,Peter L. Oliver,Rebecca E. McIntyre,Amarjit Bhomra,Jérôme Nicod,Xiangchao Gan,Wei Yuan,L van der Weyden,Charles A. Steward,Sendu Bala,Jim Stalker,Richard Mott,Richard Durbin,Ian J. Jackson,Anne Czechanski,José Afonso Guerra-Assunção,Leah Rae Donahue,Laura G. Reinholdt,Bret A. Payseur,Chris P. Ponting,Ewan Birney,Jonathan Flint,David J. Adams +42 more
TL;DR: These sequences provide a starting point for a new era in the functional analysis of a key model organism and show that the molecular nature of functional variants and their position relative to genes vary according to the effect size of the locus.
Journal ArticleDOI
PARK2 deletions occur frequently in sporadic colorectal cancer and accelerate adenoma development in Apc mutant mice
George Poulogiannis,Rebecca E. McIntyre,Maria Dimitriadi,John R. Apps,Catherine H. Wilson,Koichi Ichimura,Feijun Luo,Lewis C. Cantley,Andrew H. Wyllie,David J. Adams,Mark J. Arends +10 more
TL;DR: It is shown that deficiency in expression of PARK2 is significantly associated with adenomatous polyposis coli (APC) deficiency in human colorectal cancer, and it is concluded that Park2 is a tumor suppressor gene whose haploinsufficiency cooperates with mutant APC in colore CT cancers.
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Disruption of mouse Slx4, a regulator of structure-specific nucleases, phenocopies Fanconi anemia.
Gerry P. Crossan,Louise van der Weyden,Iván V. Rosado,Frederic Langevin,Pierre-Henri L. Gaillard,Rebecca E. McIntyre,Sanger Mouse Genetics,Ferdia A. Gallagher,Mikko I. Kettunen,David Y. Lewis,Kevin M. Brindle,Mark J. Arends,David J. Adams,Ketan J. Patel,Ketan J. Patel +14 more
TL;DR: The phenotype of the Btbd12 knockout mouse is described, the mouse ortholog of SLX4, which recapitulates many key features of the human genetic illness Fanconi anemia and genetically links a regulator of nuclease incision complexes to the FanconiAnemia DNA crosslink repair pathway.
Journal ArticleDOI
High levels of RNA-editing site conservation amongst 15 laboratory mouse strains.
Petr Danecek,Christoffer Nellåker,Rebecca E. McIntyre,Jorge E Buendia-Buendia,Suzannah Bumpstead,Chris P. Ponting,Chris P. Ponting,Jonathan Flint,Richard Durbin,Thomas M. Keane,David J. Adams +10 more
TL;DR: In the Cds2 gene, evidence for RNA editing acting to preserve the ancestral transcript sequence despite genomic sequence divergence is found, showing that despite over two million years of evolutionary divergence, the sites edited and the level of editing at each site is remarkably consistent across the 15 strains.
Journal ArticleDOI
Quantifying the contribution of recessive coding variation to developmental disorders.
Hilary C. Martin,Wendy D Jones,Wendy D Jones,Rebecca E. McIntyre,Gabriela Sánchez-Andrade,Mark Sanderson,James Stephenson,James Stephenson,Carla P. Jones,Juliet Handsaker,Giuseppe Gallone,Michaela Bruntraeger,Jeremy F. McRae,Elena Prigmore,Patrick J. Short,Mari Niemi,Joanna Kaplanis,Elizabeth J. Radford,Elizabeth J. Radford,Nadia Akawi,Meena Balasubramanian,John Dean,Rachel Horton,Alice Hulbert,Diana S. Johnson,Katie Johnson,Dhavendra Kumar,Sally Ann Lynch,Sarju G. Mehta,Jenny Morton,Michael J. Parker,Miranda Splitt,Peter D. Turnpenny,Pradeep C. Vasudevan,Michael Wright,Andrew R. Bassett,Sebastian S. Gerety,Caroline F. Wright,David R. FitzPatrick,Helen V. Firth,Helen V. Firth,Matthew E. Hurles,Jeffrey C. Barrett +42 more
TL;DR: The results suggest that recessive coding variants account for a small fraction of currently undiagnosed nonconsanguineous individuals, and that the role of noncoding variants, incomplete penetrance, and polygenic mechanisms need further exploration.