S
Stefano Lonardi
Researcher at University of California, Riverside
Publications - 190
Citations - 18660
Stefano Lonardi is an academic researcher from University of California, Riverside. The author has contributed to research in topics: Genome & Gene. The author has an hindex of 53, co-authored 180 publications receiving 16765 citations. Previous affiliations of Stefano Lonardi include University of Verona & University of California.
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Proceedings ArticleDOI
A symbolic representation of time series, with implications for streaming algorithms
TL;DR: A new symbolic representation of time series is introduced that is unique in that it allows dimensionality/numerosity reduction, and it also allows distance measures to be defined on the symbolic approach that lower bound corresponding distance measuresdefined on the original series.
Journal ArticleDOI
A Whole-Genome Assembly of Drosophila
Eugene W. Myers,Granger G. Sutton,Arthur L. Delcher,Ian M. Dew,Dan P. Fasulo,Michael Flanigan,Saul A. Kravitz,Clark M. Mobarry,Knut Reinert,Karin A. Remington,Eric L. Anson,Randall Bolanos,Hui-Hsien Chou,Catherine Jordan,Aaron L. Halpern,Stefano Lonardi,Ellen M. Beasley,Rhonda C. Brandon,Lin Chen,Patrick J. Dunn,Zhongwu Lai,Yong Liang,Deborah R. Nusskern,Ming Zhan,Qing Zhang,Xiangqun Zheng,Gerald M. Rubin,Mark Raymond Adams,J. Craig Venter +28 more
TL;DR: The quality of a whole-genome assembly of Drosophila melanogaster and the nature of the computer algorithms that accomplished it are reported on and should be of substantial value to the scientific community.
Journal ArticleDOI
Experiencing SAX: a novel symbolic representation of time series
TL;DR: The utility of the new symbolic representation of time series formed is demonstrated, which allows dimensionality/numerosity reduction, and it also allows distance measures to be defined on the symbolic approach that lower bound corresponding distance measuresdefined on the original series.
Journal ArticleDOI
A physical, genetic and functional sequence assembly of the barley genome
Klaus F. X. Mayer,Robbie Waugh,Peter Langridge,Timothy J. Close,Roger P. Wise,Andreas Graner,Takashi Matsumoto,Kazuhiro Sato,Alan H. Schulman,Ruvini Ariyadasa,Daniela Schulte,Naser Poursarebani,Ruonan Zhou,Burkhard Steuernagel,Martin Mascher,Uwe Scholz,Bu-Jun Shi,Kavitha Madishetty,Jan T. Svensson,Prasanna R. Bhat,Matthew J. Moscou,Josh Resnik,Gary J. Muehlbauer,Pete E. Hedley,Hui Liu,Jenny Morris,Zeev Frenkel,Avraham Korol,Hélène Bergès,Stefan Taudien,Marius Felder,Marco Groth,Matthias Platzer,Axel Himmelbach,Stefano Lonardi,Denisa Duma,Matthew Alpert,Francesa Cordero,Francesa Cordero,Marco Beccuti,Gianfranco Ciardo,Yaqin Ma,Steve Wanamaker,Federica Cattonaro,Vera Vendramin,Simone Scalabrin,Slobodanka Radovic,Rod A. Wing,Michele Morgante,Thomas Nussbaumer,Heidrun Gundlach,Mihaela Martis,Jesse Poland,Matthias Pfeifer,Cédric Moisy,Jaakko Tanskanen,Andrea Zuccolo,Manuel Spannagl,Joanne Russell,Arnis Druka,David Marshall,Micha Bayer,David Swarbreck,Dharanya Sampath,Sarah Ayling,Melanie Febrer,Mario Caccamo,Tsuyoshi Tanaka,Steve Wannamaker,Thomas Schmutzer,John W. S. Brown,John W. S. Brown,Geoffrey B. Fincher,Nils Stein +73 more
TL;DR: An integrated and ordered physical, genetic and functional sequence resource that describes the barley gene-space in a structured whole-genome context and suggests that post-transcriptional processing forms an important regulatory layer.
Journal ArticleDOI
A chromosome conformation capture ordered sequence of the barley genome
Martin Mascher,Heidrun Gundlach,Axel Himmelbach,Sebastian Beier,Sven Twardziok,Thomas Wicker,Volodymyr Radchuk,Christoph Dockter,Pete E. Hedley,Joanne Russell,Micha Bayer,Luke Ramsay,Hui Liu,Georg Haberer,Xiao-Qi Zhang,Qisen Zhang,Roberto A. Barrero,Lin Li,Stefan Taudien,Marco Groth,Marius Felder,Alex Hastie,Hana Šimková,Helena Staňková,Jan Vrána,Saki Chan,María Muñoz-Amatriaín,Rachid Ounit,Steve Wanamaker,Dan Bolser,Christian Colmsee,Thomas Schmutzer,Lala Aliyeva-Schnorr,Stefano Grasso,Jaakko Tanskanen,Anna Chailyan,Dharanya Sampath,Darren Heavens,Leah Clissold,Sujie Cao,Brett Chapman,Fei Dai,Yong Han,Hua Li,Xuan Li,Chongyun Lin,John K. McCooke,Cong Tan,Penghao Wang,Songbo Wang,Shuya Yin,Gaofeng Zhou,Jesse Poland,Matthew I. Bellgard,Ljudmilla Borisjuk,Andreas Houben,Jaroslav Doležel,Sarah Ayling,Stefano Lonardi,Paul J. Kersey,Peter Langridge,Gary J. Muehlbauer,Matthew D. Clark,Matthew D. Clark,Mario Caccamo,Mario Caccamo,Alan H. Schulman,Klaus F. X. Mayer,Matthias Platzer,Timothy J. Close,Uwe Scholz,Mats Hansson,Guoping Zhang,Ilka Braumann,Manuel Spannagl,Chengdao Li,Chengdao Li,Chengdao Li,Robbie Waugh,Robbie Waugh,Nils Stein,Nils Stein +81 more
TL;DR: The importance of the barley reference sequence for breeding is demonstrated by inspecting the genomic partitioning of sequence variation in modern elite germplasm, highlighting regions vulnerable to genetic erosion.