K
Kavitha Madishetty
Researcher at University of California, Riverside
Publications - 9
Citations - 2073
Kavitha Madishetty is an academic researcher from University of California, Riverside. The author has contributed to research in topics: Hordeum vulgare & Genome. The author has an hindex of 6, co-authored 9 publications receiving 1929 citations.
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Journal ArticleDOI
A physical, genetic and functional sequence assembly of the barley genome
Klaus F. X. Mayer,Robbie Waugh,Peter Langridge,Timothy J. Close,Roger P. Wise,Andreas Graner,Takashi Matsumoto,Kazuhiro Sato,Alan H. Schulman,Ruvini Ariyadasa,Daniela Schulte,Naser Poursarebani,Ruonan Zhou,Burkhard Steuernagel,Martin Mascher,Uwe Scholz,Bu-Jun Shi,Kavitha Madishetty,Jan T. Svensson,Prasanna R. Bhat,Matthew J. Moscou,Josh Resnik,Gary J. Muehlbauer,Pete E. Hedley,Hui Liu,Jenny Morris,Zeev Frenkel,Avraham Korol,Hélène Bergès,Stefan Taudien,Marius Felder,Marco Groth,Matthias Platzer,Axel Himmelbach,Stefano Lonardi,Denisa Duma,Matthew Alpert,Francesa Cordero,Francesa Cordero,Marco Beccuti,Gianfranco Ciardo,Yaqin Ma,Steve Wanamaker,Federica Cattonaro,Vera Vendramin,Simone Scalabrin,Slobodanka Radovic,Rod A. Wing,Michele Morgante,Thomas Nussbaumer,Heidrun Gundlach,Mihaela Martis,Jesse Poland,Matthias Pfeifer,Cédric Moisy,Jaakko Tanskanen,Andrea Zuccolo,Manuel Spannagl,Joanne Russell,Arnis Druka,David Marshall,Micha Bayer,David Swarbreck,Dharanya Sampath,Sarah Ayling,Melanie Febrer,Mario Caccamo,Tsuyoshi Tanaka,Steve Wannamaker,Thomas Schmutzer,John W. S. Brown,John W. S. Brown,Geoffrey B. Fincher,Nils Stein +73 more
TL;DR: An integrated and ordered physical, genetic and functional sequence resource that describes the barley gene-space in a structured whole-genome context and suggests that post-transcriptional processing forms an important regulatory layer.
Journal ArticleDOI
Development and implementation of high-throughput SNP genotyping in barley
Timothy J. Close,Prasanna R. Bhat,Prasanna R. Bhat,Stefano Lonardi,Yonghui Wu,Yonghui Wu,Nils Rostoks,Nils Rostoks,Luke Ramsay,Arnis Druka,Nils Stein,Jan T. Svensson,Jan T. Svensson,Steve Wanamaker,Serdar Bozdag,Mikeal L. Roose,Matthew J. Moscou,Matthew J. Moscou,Shiaoman Chao,Rajeev K. Varshney,Rajeev K. Varshney,Péter Szűcs,Kazuhiro Sato,Patrick M. Hayes,David E. Matthews,Andris Kleinhofs,Gary J. Muehlbauer,Joseph DeYoung,David Marshall,Kavitha Madishetty,Raymond D. Fenton,Pascal Condamine,Andreas Graner,Robbie Waugh +33 more
TL;DR: A high-density consensus genetic map of barley based only on complete and error-free datasets and genic markers, represented accurately by graphs and approximately by a best-fit linear order, and supported by a readily available SNP genotyping resource is presented in this paper.
Journal ArticleDOI
OligoSpawn: a software tool for the design of overgo probes from large unigene datasets
TL;DR: In this article, the design of overlapping oligonucleotide (overgo) probes from large unigene (EST-contigs) datasets was studied and the authors proposed a method to solve the problem.
Journal ArticleDOI
Sequencing of 15 622 gene-bearing BACs clarifies the gene-dense regions of the barley genome
María Muñoz-Amatriaín,Stefano Lonardi,Ming-Cheng Luo,Kavitha Madishetty,Jan T. Svensson,Matthew J. Moscou,Matthew J. Moscou,Steve Wanamaker,Tao Jiang,Andris Kleinhofs,Gary J. Muehlbauer,Roger P. Wise,Nils Stein,Yaqin Ma,Yaqin Ma,Edmundo Rodriguez,Edmundo Rodriguez,Dave Kudrna,Prasanna R. Bhat,Prasanna R. Bhat,Shiaoman Chao,Pascal Condamine,Shane Heinen,Josh Resnik,Josh Resnik,Rod A. Wing,Heather Witt,Heather Witt,Matthew Alpert,Marco Beccuti,Marco Beccuti,Serdar Bozdag,Serdar Bozdag,Francesca Cordero,Francesca Cordero,Hamid Mirebrahim,Rachid Ounit,Yonghui Wu,Yonghui Wu,Frank You,Frank You,Jie Zheng,Jie Zheng,Hana Šimková,Jaroslav Dolezel,Jane Grimwood,Jane Grimwood,Jeremy Schmutz,Jeremy Schmutz,Denisa Duma,Denisa Duma,Lothar Altschmied,Tom Blake,Phil Bregitzer,Laurel Cooper,Muharrem Dilbirligi,Anders Falk,Leila Feiz,Leila Feiz,Andreas Graner,Perry Gustafson,Patrick M. Hayes,Peggy G. Lemaux,Jafar Mammadov,Jafar Mammadov,Timothy J. Close +65 more
TL;DR: Exploration of sequenced BAC sequences revealed that although distal ends of chromosomes contain most of the gene‐enriched BACs and are characterized by high recombination rates, there are also gene‐dense regions with suppressed recombination.
Journal ArticleDOI
An improved method to identify BAC clones using pooled overgos
TL;DR: The use of overgos is improved by increasing the yield of positive clones using reduced levels of radioisotopes and enzyme and the resulting cost savings and reduced human exposure to radiation make the use of highly pooled overgo probes a more attractive approach for screening of BAC libraries from organisms with large genomes.