S
Steven G. Schroeder
Researcher at Agricultural Research Service
Publications - 31
Citations - 1929
Steven G. Schroeder is an academic researcher from Agricultural Research Service. The author has contributed to research in topics: Gene & Genome. The author has an hindex of 22, co-authored 31 publications receiving 1361 citations. Previous affiliations of Steven G. Schroeder include University of Maryland, College Park.
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Journal ArticleDOI
De novo assembly of the cattle reference genome with single-molecule sequencing.
Benjamin D. Rosen,Derek M. Bickhart,Robert D. Schnabel,Sergey Koren,Christine G. Elsik,Elizabeth Tseng,Troy N. Rowan,Wai Yee Low,Aleksey V. Zimin,Christine Couldrey,Richard Hall,Wenli Li,Arang Rhie,Jay Ghurye,Stephanie D. McKay,Françoise Thibaud-Nissen,Jinna Hoffman,Brenda M. Murdoch,Warren M Snelling,Tara G. McDaneld,John A. Hammond,John C. Schwartz,Wilson Nandolo,Wilson Nandolo,Darren E. Hagen,Christian Dreischer,Sebastian J. Schultheiss,Steven G. Schroeder,Adam M. Phillippy,John B. Cole,Curtis P. Van Tassell,George E. Liu,Timothy P. L. Smith,Juan F. Medrano +33 more
TL;DR: It is demonstrated that improved continuity of assembled sequence warrants the adoption of ARS-UCD1.2 as the new cattle reference genome and that increased assembly accuracy will benefit future research on this species.
Journal ArticleDOI
An improved pig reference genome sequence to enable pig genetics and genomics research
Amanda Warr,Nabeel A. Affara,Bronwen Aken,Hamid Beiki,Derek M. Bickhart,Konstantinos Billis,William Chow,Lel Eory,Heather Finlayson,Paul Flicek,Carlos García Girón,Darren K. Griffin,Richard Hall,Gregory Hannum,Thibaut Hourlier,Kerstin Howe,David A. Hume,David A. Hume,Osagie G. Izuogu,Kristi Kim,Sergey Koren,Haibo Liu,Nancy Manchanda,Fergal J. Martin,Dan J. Nonneman,Rebecca E. O’Connor,Adam M. Phillippy,Gary A. Rohrer,Benjamin D. Rosen,Laurie A. Rund,Carole A. Sargent,Lawrence B. Schook,Steven G. Schroeder,Ariel S. Schwartz,Benjamin M. Skinner,Richard Talbot,Elizabeth Tseng,Christopher K. Tuggle,Mick Watson,Timothy P L Smith,Alan Archibald +40 more
TL;DR: These highly contiguous assemblies plus annotation of a further 11 short-read assemblies provide an unprecedented view of the genetic make-up of this important agricultural and biomedical model species.
Journal ArticleDOI
Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle.
Stephen D. E. Park,David A. Magee,David A. Magee,Paul A. McGettigan,Matthew D. Teasdale,Ceiridwen J. Edwards,Amanda J. Lohan,Alison Murphy,Martin Braud,Mark T.A. Donoghue,Yuan Liu,Andrew T. Chamberlain,Kevin Rue-Albrecht,Steven G. Schroeder,Charles Spillane,Shuaishuai Tai,Daniel G. Bradley,Tad S. Sonstegard,Brendan J. Loftus,David E. MacHugh +19 more
TL;DR: Phylogenomic analyses place the aurochs as a distinct outgroup to the domestic B. taurus lineage, supporting the predominant Near Eastern origin of European cattle, and reveals that the interface between early European domestic populations and wild auroChs was significantly more complex than previously thought.
Journal ArticleDOI
MicroRNA expression profiles of bovine milk exosomes in response to Staphylococcus aureus infection.
Jiajie Sun,Kshama Aswath,Steven G. Schroeder,John D. Lippolis,Timothy A. Reinhardt,Tad S. Sonstegard +5 more
TL;DR: The authors' survey of miRNA expression from uninfected milk exosomes and those produced in response to infection provides new and comprehensive information supporting a role for delivery into milk of specific miRNAs involved in immune response.
Journal ArticleDOI
Genomic Signatures Reveal New Evidences for Selection of Important Traits in Domestic Cattle
Lingyang Xu,Derek M. Bickhart,John B. Cole,Steven G. Schroeder,Jiuzhou Song,Curtis P. Van Tassell,Tad S. Sonstegard,George E. Liu +7 more
TL;DR: This work investigated diverse genomic selections using high-density single nucleotide polymorphism data of five distinct cattle breeds to provide a glimpse into diverse genomic selection during cattle domestication, breed formation, and recent genetic improvement.