T
Tyrone J. Summers
Researcher at National Institutes of Health
Publications - 6
Citations - 811
Tyrone J. Summers is an academic researcher from National Institutes of Health. The author has contributed to research in topics: Genome & Comparative genomics. The author has an hindex of 6, co-authored 6 publications receiving 801 citations.
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Journal ArticleDOI
Comparative analyses of multi-species sequences from targeted genomic regions
James W. Thomas,James W. Thomas,Jeffrey W. Touchman,Robert W. Blakesley,Gerry Bouffard,Stephen M. Beckstrom-Sternberg,Elliott H. Margulies,Mathieu Blanchette,Adam Siepel,Pamela J. Thomas,Jenny McDowell,Baishali Maskeri,Nancy F. Hansen,M. S. Schwartz,R. J. Weber,W. J. Kent,Donna Karolchik,T. C. Bruen,R. Bevan,David J. Cutler,Scott Schwartz,Laura Elnitski,Jacquelyn R. Idol,Arjun B. Prasad,Shih-Queen Lee-Lin,Valerie Maduro,Tyrone J. Summers,Matthew E. Portnoy,Nicole Dietrich,N. Akhter,K. Ayele,Betty Benjamin,K. Cariaga,Charles P. Brinkley,Shelise Brooks,S. Granite,Xin-Yuan Guan,Jyoti Gupta,P. Haghighi,S. L. Ho,M. C. Huang,Eric Karlins,P. L. Laric,Richelle Legaspi,M. J. Lim,Quino Maduro,Cathy Masiello,Stephen D. Mastrian,J. C. McCloskey,R. Pearson,Sirintorn Stantripop,Emmanuelle Tiongson,J. T. Tran,C. Tsurgeon,Jennifer Vogt,M. A. Walker,Keith Wetherby,L. S. Wiggins,Alice C. Young,L. H. Zhang,Kazutoyo Osoegawa,Baoli Zhu,B. Zhao,C. L. Shu,P. J. De Jong,Charles E. Lawrence,Arian F.A. Smit,Aravinda Chakravarti,David Haussler,Philip Green,Webb Miller,Eric D. Green +71 more
TL;DR: The generation and analysis of over 12 megabases of sequence from 12 species, all derived from the genomic region orthologous to a segment of about 1.8 Mb on human chromosome 7 containing ten genes, show conservation reflecting both functional constraints and the neutral mutational events that shaped this genomic region.
Journal ArticleDOI
Parallel Construction of Orthologous Sequence-Ready Clone Contig Maps in Multiple Species
James W. Thomas,Arjun B. Prasad,Tyrone J. Summers,Shih-Queen Lee-Lin,Valerie Maduro,Jacquelyn R. Idol,Joseph F. Ryan,Pamela J. Thomas,Jennifer C. McDowell,Eric D. Green +9 more
TL;DR: A robust and scalable strategy for simultaneously constructing sequence-ready bacterial artificial chromosome (BAC) contig maps from targeted genomic regions has been developed using "universal" oligonucleotide-based hybridization probes designed from sequences that are highly conserved between distantly related species.
Journal ArticleDOI
Pericentromeric Duplications in the Laboratory Mouse
James W. Thomas,Mary G. Schueler,Tyrone J. Summers,Robert W. Blakesley,Jennifer C. McDowell,Pamela J. Thomas,Jacquelyn R. Idol,Valerie Maduro,Shih-Queen Lee-Lin,Jeffrey W. Touchman,Gerard G. Bouffard,Stephen M. Beckstrom-Sternberg,Nisc Comparative Sequencing Program,Eric D. Green +13 more
TL;DR: The data indicate that the duplications associated with mouse chromosomes 5 and 6 are recent and that the resulting duplicated segments share significant sequence similarity with a series of regions near the centromeres of the mouse chromosomes previously identified by cytogenetic mapping.
Journal ArticleDOI
Recombination Has Little Effect on the Rate of Sequence Divergence in Pseudoautosomal Boundary 1 Among Humans and Great Apes
TL;DR: Direct and indirect evidence indicates that the recombination rate is, indeed, much higher in PAR1 introns than in X-specific introns, and that the present PAB has persisted since the common ancestor of hominoids, therefore, the mutagenic effect of recombination is far weaker than previously proposed, at least in hominoid PABs.
Journal ArticleDOI
Comparative Genome Mapping in the Sequence-based Era: Early Experience with Human Chromosome 7
James W. Thomas,Tyrone J. Summers,Shih-Queen Lee-Lin,Valerie Maduro,Jacquelyn R. Idol,Stephen D. Mastrian,Joseph F. Ryan,D. Curtis Jamison,Eric D. Green +8 more
TL;DR: How the first glimpses of genomic sequence from human chromosome 7 are directly facilitating human-mouse comparative maps and sequence-ready mouse physical maps are described to illustrate how the availability of genomic sequences directly facilitates studies in comparative genomics and genome evolution.