S
Soojin V. Yi
Researcher at Georgia Institute of Technology
Publications - 121
Citations - 8007
Soojin V. Yi is an academic researcher from Georgia Institute of Technology. The author has contributed to research in topics: DNA methylation & Epigenetics. The author has an hindex of 42, co-authored 115 publications receiving 6915 citations. Previous affiliations of Soojin V. Yi include University of California, Santa Barbara & University of the Basque Country.
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Journal ArticleDOI
The genome of Tetranychus urticae reveals herbivorous pest adaptations
Miodrag Grbic,Miodrag Grbic,Thomas Van Leeuwen,Richard M. Clark,Stephane Rombauts,Pierre Rouzé,Vojislava Grbic,Vojislava Grbic,Edward J. Osborne,Wannes Dermauw,Phuong Cao Thi Ngoc,Félix Ortego,Pedro Hernández-Crespo,Isabel Diaz,Manuel Martinez,Maria Navajas,Élio Sucena,Élio Sucena,Sara Magalhães,Lisa M. Nagy,Ryan M. Pace,Sergej Djuranovic,Guy Smagghe,Masatoshi Iga,Olivier Christiaens,Jan A. Veenstra,John Ewer,Rodrigo Mancilla Villalobos,Jeffrey L. Hutter,Stephen D. Hudson,Marisela Vélez,Marisela Vélez,Soojin V. Yi,Jia Zeng,Andre Pires-daSilva,Fernando Roch,Marc Cazaux,Marie Navarro,Vladimir Zhurov,Gustavo Acevedo,Anica Bjelica,Jeffrey A. Fawcett,Jeffrey A. Fawcett,Eric Bonnet,Eric Bonnet,Cindy Martens,Guy Baele,Lothar Wissler,Aminael Sánchez-Rodríguez,Luc Tirry,Catherine Blais,Kristof Demeestere,Stefan R. Henz,T. Ryan Gregory,Johannes Mathieu,Lou Verdon,Laurent Farinelli,Jeremy Schmutz,Erika Lindquist,René Feyereisen,Yves Van de Peer +60 more
TL;DR: The Tetranychus urticae genome is the smallest known arthropod genome as discussed by the authors, which represents the first complete chelicerate genome for a pest and has been annotated with genes associated with feeding on different hosts.
Journal ArticleDOI
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species.
John H. Werren,Stephen Richards,Christopher A. Desjardins,Oliver Niehuis,Jürgen Gadau,John K. Colbourne,Leo W. Beukeboom,Claude Desplan,Christine G. Elsik,Cornelis J. P. Grimmelikhuijzen,Paul Kitts,Jeremy A. Lynch,Terence Murphy,Deodoro C. S. G. Oliveira,Christopher D. Smith,Christopher D. Smith,Louis De Van Zande,Kim C. Worley,Evgeny M. Zdobnov,Maarten Aerts,Stefan Albert,Víctor Hugo Anaya,Juan Manuel Anzola,Angel Roberto Barchuk,Susanta K. Behura,Agata N. Bera,May R. Berenbaum,Rinaldo C. Bertossa,Márcia Maria Gentile Bitondi,Seth R. Bordenstein,Peer Bork,Erich Bornberg-Bauer,Marleen Brunain,Giuseppe Cazzamali,Lesley S. Chaboub,Joseph Chacko,Dean Chavez,Christopher P. Childers,Jeong Hyeon Choi,Michael E. Clark,Charles Claudianos,Rochelle A. Clinton,Andrew Cree,Alexandre S. Cristino,Alexandre S. Cristino,Phat M. Dang,Alistair C. Darby,Dirk C. de Graaf,Bart Devreese,Huyen Dinh,Rachel Edwards,Navin Elango,Eran Elhaik,Olga Ermolaeva,Jay D. Evans,Sylvain Forêt,Gerald R. Fowler,Daniel Gerlach,Joshua D. Gibson,Donald G. Gilbert,Dan Graur,Stefan Gründer,Darren E. Hagen,Yi Han,Frank Hauser,Da Hultmark,Henry C. Hunter,Gregory D. D. Hurst,Shalini N. Jhangian,Huaiyang Jiang,Reed M. Johnson,Andrew K. Jones,Thomas Junier,Tatsuhiko Kadowaki,A. Kamping,Yuri Kapustin,Bobak D. Kechavarzi,Jaebum Kim,Jay Kim,Boris Kiryutin,T. Koevoets,Christie Kovar,Evgenia V. Kriventseva,Robert Kucharski,Heewook Lee,Sandra L. Lee,Kristin Lees,Lora Lewis,David W. Loehlin,John M. Logsdon,Jacqueline Lopez,Ryan J. Lozado,Donna Maglott,Ryszard Maleszka,Anoop Mayampurath,Danielle J. Mazur,Marcella A. McClure,Andrew D. Moore,Margaret Morgan,Jean Muller,Monica Munoz-Torres,Donna M. Muzny,Lynne V. Nazareth,Susanne Neupert,Ngoc Nguyen,Francis M. F. Nunes,John G. Oakeshott,Geoffrey Okwuonu,Bart A. Pannebakker,Vikas Pejaver,Zuogang Peng,Stephen C. Pratt,Reinhard Predel,Ling Ling Pu,Hilary Ranson,Rhitoban Raychoudhury,Andreas Rechtsteiner,Andreas Rechtsteiner,Justin T. Reese,Jeffrey G. Reid,Megan Riddle,I. I. Hugh M Robertson,Jeanne Romero-Severson,Miriam I. Rosenberg,Timothy B. Sackton,David B. Sattelle,Helge Schlüns,Thomas Schmitt,Martina Schneider,Andreas Schüler,Andrew M. Schurko,David M. Shuker,Zilá Luz Paulino Simões,Saurabh Sinha,Zachary Smith,Victor V. Solovyev,Alexandre Souvorov,Andreas Springauf,Elisabeth Stafflinger,Deborah E. Stage,Deborah E. Stage,Mario Stanke,Yoshiaki Tanaka,Arndt Telschow,Carol Trent Selina Vattathil,I. I. Eveline C Verhulst,Lumi Viljakainen,Kevin W. Wanner,Robert M. Waterhouse,James B. Whitfield,Timothy E. Wilkes,Michael Williamson,Judith H. Willis,Florian Wolschin,Stefan Wyder,Stefan Wyder,Takuji Yamada,Soojin V. Yi,Courtney N. Zecher,Lan Zhang,Lan Zhang,Richard A. Gibbs +161 more
TL;DR: Key findings include the identification of a functional DNA methylation tool kit; hymenopteran-specific genes including diverse venoms; lateral gene transfers among Pox viruses, Wolbachia, and Nasonia; and the rapid evolution of genes involved in nuclear-mitochondrial interactions that are implicated in speciation.
Journal ArticleDOI
On the presence and role of human gene-body DNA methylation
TL;DR: A model holds that the repression of intragenic transcription by gene- body methylation is largely epiphenomenal, and suggests that gene-body methylation levels are predominantly shaped via the accessibility of the DNA to methylating enzyme complexes.
Journal ArticleDOI
The genome of the fire ant Solenopsis invicta
Yannick Wurm,John Wang,Oksana Riba-Grognuz,Miguel Corona,Sanne Nygaard,Brendan G. Hunt,Krista K. Ingram,Laurent Falquet,Mingkwan Nipitwattanaphon,Dietrich Gotzek,Michiel B. Dijkstra,Jan Oettler,Fabien Comtesse,Cheng-Jen Shih,Wen-Jer Wu,Chin-Cheng Yang,Jérôme Thomas,Emmanuel Beaudoing,Sylvain Pradervand,Volker Flegel,Erin D. Cook,Roberto Fabbretti,Heinz Stockinger,Li Long,William G. Farmerie,Jane Oakey,Jacobus J. Boomsma,Pekka Pamilo,Soojin V. Yi,Jürgen Heinze,Michael A. D. Goodisman,Laurent Farinelli,Keith Harshman,Nicolas Hulo,Lorenzo Cerutti,Ioannis Xenarios,DeWayne Shoemaker,Laurent Keller +37 more
TL;DR: A phylogenetic analysis revealed that an ancestral vitellogenin gene first underwent a duplication that was followed by possibly independent duplications of each of the daughter viteLLogenins, possibly reflecting differential selection acting on the queen and worker castes.
Journal ArticleDOI
DNA methylation is widespread and associated with differential gene expression in castes of the honeybee, Apis mellifera.
TL;DR: The results highlight the potential significance of epigenetic modifications, such as DNA methylation, in developmental processes in social insects and provide fertile ground for future studies of phenotypic plasticity and genomic imprinting.