Z
Zdeněk Kameník
Researcher at Academy of Sciences of the Czech Republic
Publications - 16
Citations - 874
Zdeněk Kameník is an academic researcher from Academy of Sciences of the Czech Republic. The author has contributed to research in topics: Lincomycin & Solid phase extraction. The author has an hindex of 11, co-authored 14 publications receiving 423 citations. Previous affiliations of Zdeněk Kameník include Charles University in Prague.
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Journal ArticleDOI
Feature-based molecular networking in the GNPS analysis environment.
Louis-Félix Nothias,Louis-Félix Nothias,Daniel Petras,Daniel Petras,Robin Schmid,Kai Dührkop,Johannes Rainer,Abinesh Sarvepalli,Abinesh Sarvepalli,Ivan Protsyuk,Madeleine Ernst,Madeleine Ernst,Madeleine Ernst,Hiroshi Tsugawa,Markus Fleischauer,Fabian Aicheler,Alexander A. Aksenov,Alexander A. Aksenov,Oliver Alka,Pierre-Marie Allard,Aiko Barsch,Xavier Cachet,Andrés Mauricio Caraballo-Rodríguez,Andrés Mauricio Caraballo-Rodríguez,Ricardo Silva,Ricardo Silva,Tam Dang,Tam Dang,Neha Garg,Julia M. Gauglitz,Julia M. Gauglitz,Alexey Gurevich,Giorgis Isaac,Alan K. Jarmusch,Alan K. Jarmusch,Zdeněk Kameník,Kyo Bin Kang,Kyo Bin Kang,Kyo Bin Kang,Nikolas Kessler,Irina Koester,Irina Koester,Ansgar Korf,Audrey Le Gouellec,Marcus Ludwig,Christian Martin H,Laura-Isobel McCall,Jonathan McSayles,Sven W. Meyer,Hosein Mohimani,Mustafa Morsy,Oriane Moyne,Oriane Moyne,Steffen Neumann,Heiko Neuweger,Ngoc Hung Nguyen,Ngoc Hung Nguyen,Mélissa Nothias-Esposito,Mélissa Nothias-Esposito,Julien Paolini,Vanessa V. Phelan,Tomáš Pluskal,Robert A. Quinn,Simon Rogers,Bindesh Shrestha,Anupriya Tripathi,Anupriya Tripathi,Justin J. J. van der Hooft,Justin J. J. van der Hooft,Justin J. J. van der Hooft,Fernando Vargas,Fernando Vargas,Kelly C. Weldon,Kelly C. Weldon,Michael Witting,Heejung Yang,Zheng Zhang,Zheng Zhang,Florian Zubeil,Oliver Kohlbacher,Sebastian Böcker,Theodore Alexandrov,Theodore Alexandrov,Nuno Bandeira,Nuno Bandeira,Mingxun Wang,Mingxun Wang,Pieter C. Dorrestein +87 more
TL;DR: Feature-based molecular networking (FBMN) as discussed by the authors is an analysis method in the Global Natural Products Social Molecular Networking (GNPS) infrastructure that builds on chromatographic feature detection and alignment tools.
Journal ArticleDOI
Ion identity molecular networking for mass spectrometry-based metabolomics in the GNPS environment.
Robin Schmid,Robin Schmid,Daniel Petras,Daniel Petras,Daniel Petras,Louis-Félix Nothias,Mingxun Wang,Allegra T. Aron,Annika Jagels,Hiroshi Tsugawa,Johannes Rainer,Mar Garcia-Aloy,Kai Dührkop,Ansgar Korf,Tomáš Pluskal,Zdeněk Kameník,Alan K. Jarmusch,Andrés Mauricio Caraballo-Rodríguez,Kelly C. Weldon,Mélissa Nothias-Esposito,Alexander A. Aksenov,Alexander A. Aksenov,Anelize Bauermeister,Anelize Bauermeister,Andrea Georgina Albarracín Orio,Carlismari O. Grundmann,Carlismari O. Grundmann,Fernando Vargas,Irina Koester,Julia M. Gauglitz,Emily C. Gentry,Yannick Hövelmann,Svetlana A. Kalinina,Matthew A. Pendergraft,Morgan Panitchpakdi,Richard M. Tehan,Audrey Le Gouellec,Gajender Aleti,Helena Mannochio Russo,Helena Mannochio Russo,Birgit Arndt,Florian Hübner,Heiko Hayen,Hui Zhi,Manuela Raffatellu,Kimberly A. Prather,Lihini I. Aluwihare,Sebastian Böcker,Kerry L. McPhail,Hans-Ulrich Humpf,Uwe Karst,Pieter C. Dorrestein,Pieter C. Dorrestein +52 more
TL;DR: IIMN as mentioned in this paper integrates chromatographic peak shape correlation analysis into molecular networks to connect and collapse different ion species of the same molecule, which can be used to reveal unknown ion-ligand complexes.
Posted ContentDOI
Feature-based Molecular Networking in the GNPS Analysis Environment
Louis-Félix Nothias,Daniel Petras,Robin Schmid,Kai Dührkop,Johannes Rainer,Abinesh Sarvepalli,Ivan Protsyuk,Madeleine Ernst,Madeleine Ernst,Hiroshi Tsugawa,Markus Fleischauer,Fabian Aicheler,Alexander A. Aksenov,Oliver Alka,Pierre-Marie Allard,Aiko Barsch,Xavier Cachet,Mauricio Caraballo,Ricardo Silva,Ricardo Silva,Tam Dang,Tam Dang,Neha Garg,Julia M. Gauglitz,Alexey Gurevich,Giorgis Isaac,Alan K. Jarmusch,Zdeněk Kameník,Kyo Bin Kang,Kyo Bin Kang,Nikolas Kessler,Irina Koester,Ansgar Korf,Audrey Le Gouellec,Marcus Ludwig,Martin H. Christian,Laura-Isobel McCall,Jonathan McSayles,Sven W. Meyer,Hosein Mohimani,Mustafa Morsy,Oriane Moyne,Oriane Moyne,Steffen Neumann,Heiko Neuweger,Ngoc Hung Nguyen,Mélissa Nothias-Esposito,Julien Paolini,Vanessa V. Phelan,Tomáš Pluskal,Robert A. Quinn,Simon Rogers,Bindesh Shrestha,Anupriya Tripathi,Justin J. J. van der Hooft,Justin J. J. van der Hooft,Fernando Vargas,Kelly C. Weldon,Kelly C. Weldon,Michael Witting,Heejung Yang,Zheng Zhang,Florian Zubeil,Oliver Kohlbacher,Sebastian Böcker,Theodore Alexandrov,Nuno Bandeira,Mingxun Wang,Pieter C. Dorrestein +68 more
TL;DR: Feature-based molecular networking (FBMN) as mentioned in this paper is a new analysis method in the Global Natural Products Social Molecular Networking (GNPSN) infrastructure that leverages feature detection and alignment tools to enhance quantitative analyses.
Journal ArticleDOI
Secondary Metabolites Produced during the Germination of Streptomyces coelicolor
Matouš Čihák,Zdeněk Kameník,Klára Šmídová,Klára Šmídová,Natalie Bergman,Oldřich Benada,Olga Kofroňová,Kateřina Petříčková,Jan Bobek,Jan Bobek +9 more
TL;DR: Using high-performance liquid chromatography-mass spectrometry, it is found that the sesquiterpenoid antibiotic albaflavenone, the polyketide germicidin A, and chalcone are produced during germination of the model streptomycete, S. coelicolor, and Interestingly, the last two compounds revealed an inhibitory effect on the germination process.
Journal ArticleDOI
Intraspecific variability in allelopathy of Heracleum mantegazzianum is linked to the metabolic profile of root exudates
TL;DR: The results present strong evidence that intraspecific variability needs to be considered in research on allelopathy, and suggest that metabolic profiling provides an efficient tool for studying chemically mediated plant-plant interactions whenever unknown metabolites are involved.