Chiba Institute of Technology

About: Chiba Institute of Technology is a education organization based out in Narashino, Japan. It is known for research contribution in the topics: RNA & Magnet. The organization has 2663 authors who have published 4999 publications receiving 56870 citations. The organization is also known as: Chiba kōgyō daigaku & Kōa Institute of Technology.

A Novel Visualization Method for Distinction of Web News Sentiment

Abstract: Recently, an increasing number of news websites have come to provide various featured services. However, effective analysis and presentation for distinction of viewpoints among different news sources are limited. We focus on the sentiment aspect of news reporters' viewpoints and propose a system called the Sentiment Map for distinguishing the sentiment of news articles and visualizing it on a geographical map based on map zoom control. The proposed system provides more detailed sentiments than conventional sentiment analysis which only considers positive and negative emotions. When a user enters one or more query keywords, the sentiment map not only retrieves news articles related to the concerned topic, but also summarizes sentiment tendencies of Web news based on specific geographical scales. Sentiments can be automatically aggregated at different levels corresponding to the change of map scales. Furthermore, we take into account the aspect of time, and show the variation in sentiment over time. Experimental evaluations conducted by a total of 100 individuals show the sentiment extraction accuracy and the visualization effect of the proposed system are good.

Interaction analysis between tmRNA and SmpB from Thermus thermophilus.

Abstract: Small protein B, SmpB, is a tmRNA-specific binding protein essential for trans-translation. We examined the interaction between SmpB and tmRNA from Thermus thermophilus, using biochemical and NMR methods. Chemical footprinting analyses using full-length tmRNA demonstrated that the sites protected upon SmpB binding are located exclusively in the tRNA-like domain (TLD) of tmRNA. To clarify the SmpB binding sites, we constructed several segments derived from TLD. Optical biosensor interaction analyses and melting profile analyses with mutational studies showed that SmpB efficiently binds to only a 30-nt segment that forms a stem and loop, with the 5' and 3' extensions composed of the D-loop and variable-loop analogues. The conserved sequences, 16UCGA and 319GAC, in the extensions are responsible for the SmpB binding. These results agree with the those visualized by the cocrystal structure of TLD and SmpB from Aquifex aeolicus. In addition, NMR chemical shift mapping analyses, using the 30-nt segment and (15)N-labeled SmpB, revealed the characteristic RNA binding mode. The hydrogen bond pattern around beta2 changes, with the Gly in beta2, which acts as a hinge, showing the largest chemical shift change. It appears that SmpB undergoes structural changes indicating an induced fit upon binding to the specific region of TLD.

Is water ice an efficient facilitator for dust coagulation

Abstract: Beyond the snow line of protoplanetary discs and inside the dense core of molecular clouds, the temperature of gas is low enough for water vapour to condense into amorphous ices on the surface of preexisting refractory dust particles. Recent numerical simulations and laboratory experiments suggest that condensation of the vapour promotes dust coagulation in such a cold region. However, in the numerical simulations, cohesion of refractory materials is often underestimated, while in the laboratory experiments, water vapour collides with surfaces at more frequent intervals compared to the real conditions. Therefore, to re-examine the role of water ice in dust coagulation, we carry out systematic investigation of available data on coagulation of water ice particles by making full use of appropriate theories in contact mechanics and tribology. We find that the majority of experimental data are reasonably well explained by lubrication theories, owing to the presence of a quasi-liquid layer (QLL). Only exceptions are the results of dynamic collisions between particles at low temperatures, which are, instead, consistent with the JKR theory, because QLLs are too thin to dissipate their kinetic energies. By considering the vacuum conditions in protoplanetary discs and molecular clouds, the formation of amorphous water ice on the surface of refractory particles does not necessarily aid their collisional growth as currently expected. While crystallisation of water ice around but outside the snow line eases coagulation of ice-coated particles, sublimation of water ice inside the snow line is deemed to facilitate coagulation of bare refractory particles.

Temperature Control Modes in Thermal Analysis

Abstract: Now we can use several temperature control modes, i.e., the isothermal run including stepwise heating and cooling, constant rate heating (or cooling), temperature control for sample thermal history, sample controlled thermal analysis (SCTA or controlled-rate thermal analysis, CRTA), temperature jump, rate jump, temperature modulation and repeated temperature scanning. Their advantages and drawbacks are reviewed with some illustrative examples, especially for application to kinetic analysis. The combined use of these varieties of temperature control mode is recommended by showing examples. Temperature modulation and repeated temperature scanning are discussed in comparison with temperature modulated DSC, and common and analogous points are elucidated. In relation to this, the possibility that an imaginary part of overall reaction rate constant in complex reaction is postulated. Finally,these modes are classified and tabulated from two viewpoints and other possible modes are shown.