Showing papers in "International Journal of Neural Systems in 2016"
TL;DR: In this paper, deep belief networks are applied on brain regions defined by the Automated Anatomical Labeling (AAL) atlas and the final prediction is determined by a voting scheme, where discriminative features are computed in an unsupervised fashion.
Abstract: Computer Aided Diagnosis (CAD) constitutes an important tool for the early diagnosis of Alzheimer's Disease (AD), which, in turn, allows the application of treatments that can be simpler and more likely to be effective. This paper explores the construction of classification methods based on deep learning architectures applied on brain regions defined by the Automated Anatomical Labeling (AAL). Gray Matter (GM) images from each brain area have been split into 3D patches according to the regions defined by the AAL atlas and these patches are used to train different deep belief networks. An ensemble of deep belief networks is then composed where the final prediction is determined by a voting scheme. Two deep learning based structures and four different voting schemes are implemented and compared, giving as a result a potent classification architecture where discriminative features are computed in an unsupervised fashion. The resulting method has been evaluated using a large dataset from the Alzheimer's disease Neuroimaging Initiative (ADNI). Classification results assessed by cross-validation prove that the proposed method is not only valid for differentiate between controls (NC) and AD images, but it also provides good performances when tested for the more challenging case of classifying Mild Cognitive Impairment (MCI) Subjects. In particular, the classification architecture provides accuracy values up to 0.90 and AUC of 0.95 for NC/AD classification, 0.84 and AUC of 0.91 for stable MCI/AD classification and 0.83 and AUC of 0.95 for NC/MCI converters classification.
307 citations
TL;DR: A systematic method to reduce the time lag in detecting initial dips using a vector-based phase diagram and an autoregressive moving average with exogenous signals (ARMAX) model-based q-step-ahead prediction algorithm and a combination of the threshold criterion and the prediction method is presented.
Abstract: In this paper, we present a systematic method to reduce the time lag in detecting initial dips using a vector-based phase diagram and an autoregressive moving average with exogenous signals (ARMAX) model-based q-step-ahead prediction algorithm. With functional near-infrared spectroscopy (fNIRS), signals related to mental arithmetic and right-hand clenching are acquired from the prefrontal and left primary motor cortices, respectively. The interrelationship between oxygenated hemoglobin, deoxygenated hemoglobin, total hemoglobin and cerebral oxygen exchange are related to initial dips. Specifically, a threshold value from the resting state hemodynamics is incorporated, as a decision criterion, into the vector-based phase diagram to determine the occurrence of initial dips. To further reduce the time lag, a [Formula: see text]-step-ahead prediction method is applied to predict the occurrence of the dips. A combination of the threshold criterion and the prediction method resulted in the delay time of about 0.9[Formula: see text]s. The results demonstrate that rapid detection of initial dip is possible and therefore can be used for real-time brain-computer interfacing.
110 citations
TL;DR: A direction-congruent bimodal paradigm by randomly and simultaneously presenting auditory and tactile stimuli from the same direction is designed that holds promise as a practical visual saccade-independent P300 BCI.
Abstract: Most P300 event-related potential (ERP)-based brain-computer interface (BCI) studies focus on gaze shift-dependent BCIs, which cannot be used by people who have lost voluntary eye movement. However, the performance of visual saccade-independent P300 BCIs is generally poor. To improve saccade-independent BCI performance, we propose a bimodal P300 BCI approach that simultaneously employs auditory and tactile stimuli. The proposed P300 BCI is a vision-independent system because no visual interaction is required of the user. Specifically, we designed a direction-congruent bimodal paradigm by randomly and simultaneously presenting auditory and tactile stimuli from the same direction. Furthermore, the channels and number of trials were tailored to each user to improve online performance. With 12 participants, the average online information transfer rate (ITR) of the bimodal approach improved by 45.43% and 51.05% over that attained, respectively, with the auditory and tactile approaches individually. Importantly, the average online ITR of the bimodal approach, including the break time between selections, reached 10.77 bits/min. These findings suggest that the proposed bimodal system holds promise as a practical visual saccade-independent P300 BCI.
90 citations
TL;DR: The findings demonstrate that the utilizing of sensitive complexity estimators to analyze brain dynamics of patients might be a useful discriminative tool for diagnostic purposes and expects that nonlinear analysis will give us deeper understanding of schizophrenics' brain.
Abstract: Complexity measures have been enormously used in schizophrenia patients to estimate brain dynamics. However, the conflicting results in terms of both increased and reduced complexity values have been reported in these studies depending on the patients' clinical status or symptom severity or medication and age status. The objective of this study is to investigate the nonlinear brain dynamics of chronic and medicated schizophrenia patients using distinct complexity estimators. EEG data were collected from 22 relaxed eyes-closed patients and age-matched healthy controls. A single-trial EEG series of 2 min was partitioned into identical epochs of 20 s intervals. The EEG complexity of participants were investigated and compared using approximate entropy (ApEn), Shannon entropy (ShEn), Kolmogorov complexity (KC) and Lempel-Ziv complexity (LZC). Lower complexity values were obtained in schizophrenia patients. The most significant complexity differences between patients and controls were obtained in especially left frontal (F3) and parietal (P3) regions of the brain when all complexity measures were applied individually. Significantly, we found that KC was more sensitive for detecting EEG complexity of patients than other estimators in all investigated brain regions. Moreover, significant inter-hemispheric complexity differences were found in the frontal and parietal areas of schizophrenics' brain. Our findings demonstrate that the utilizing of sensitive complexity estimators to analyze brain dynamics of patients might be a useful discriminative tool for diagnostic purposes. Therefore, we expect that nonlinear analysis will give us deeper understanding of schizophrenics' brain.
72 citations
TL;DR: This work considers how the centrality of a neuron correlates with its firing rate and finds that Katz centrality is the best predictor of firing rate given the network structure, with almost perfect correlation in all cases studied.
Abstract: It is clear that the topological structure of a neural network somehow determines the activity of the neurons within it. In the present work, we ask to what extent it is possible to examine the structural features of a network and learn something about its activity? Specifically, we consider how the centrality (the importance of a node in a network) of a neuron correlates with its firing rate. To investigate, we apply an array of centrality measures, including In-Degree, Closeness, Betweenness, Eigenvector, Katz, PageRank, Hyperlink-Induced Topic Search (HITS) and NeuronRank to Leaky-Integrate and Fire neural networks with different connectivity schemes. We find that Katz centrality is the best predictor of firing rate given the network structure, with almost perfect correlation in all cases studied, which include purely excitatory and excitatory–inhibitory networks, with either homogeneous connections or a small-world structure. We identify the properties of a network which will cause this correlation to...
64 citations
TL;DR: Analytical results clearly demonstrate and validate the efficacy of this online closed-loop EEG-based fatigue detection and mitigation mechanism to identify cognitive lapses that may lead to catastrophic incidents in countless operational environments.
Abstract: Research has indicated that fatigue is a critical factor in cognitive lapses because it negatively affects an individual's internal state, which is then manifested physiologically. This study explores neurophysiological changes, measured by electroencephalogram (EEG), due to fatigue. This study further demonstrates the feasibility of an online closed-loop EEG-based fatigue detection and mitigation system that detects physiological change and can thereby prevent fatigue-related cognitive lapses. More importantly, this work compares the efficacy of fatigue detection and mitigation between the EEG-based and a nonEEG-based random method. Twelve healthy subjects participated in a sustained-attention driving experiment. Each participant's EEG signal was monitored continuously and a warning was delivered in real-time to participants once the EEG signature of fatigue was detected. Study results indicate suppression of the alpha- and theta-power of an occipital component and improved behavioral performance following a warning signal; these findings are in line with those in previous studies. However, study results also showed reduced warning efficacy (i.e. increased response times (RTs) to lane deviations) accompanied by increased alpha-power due to the fluctuation of warnings over time. Furthermore, a comparison of EEG-based and nonEEG-based random approaches clearly demonstrated the necessity of adaptive fatigue-mitigation systems, based on a subject's cognitive level, to deliver warnings. Analytical results clearly demonstrate and validate the efficacy of this online closed-loop EEG-based fatigue detection and mitigation mechanism to identify cognitive lapses that may lead to catastrophic incidents in countless operational environments.
62 citations
TL;DR: The proposed novel automatic fuzzy clustering method that employs an extended membrane system with active membranes that has been designed as its computing framework was evaluated over 13 benchmark problems and was compared with four state-of-the-art automatic clustering methods, two recently developed clustering Methods and six classification techniques.
Abstract: This paper focuses on automatic fuzzy clustering problem and proposes a novel automatic fuzzy clustering method that employs an extended membrane system with active membranes that has been designed as its computing framework. The extended membrane system has a dynamic membrane structure; since membranes can evolve, it is particularly suitable for processing the automatic fuzzy clustering problem. A modification of a differential evolution (DE) mechanism was developed as evolution rules for objects according to membrane structure and object communication mechanisms. Under the control of both the object's evolution-communication mechanism and the membrane evolution mechanism, the extended membrane system can effectively determine the most appropriate number of clusters as well as the corresponding optimal cluster centers. The proposed method was evaluated over 13 benchmark problems and was compared with four state-of-the-art automatic clustering methods, two recently developed clustering methods and six classification techniques. The comparison results demonstrate the superiority of the proposed method in terms of effectiveness and robustness.
56 citations
TL;DR: A novel approach to measure nonlinear connectivity through phase coupling: the multi-spectral phase coherence (MSPC), which is applied to analyze data from a motor control experiment, where subjects performed isotonic wrist flexions while receiving movement perturbations.
Abstract: Interaction between distant neuronal populations is essential for communication within the nervous system and can occur as a highly nonlinear process. To better understand the functional role of neural interactions, it is important to quantify the nonlinear connectivity in the nervous system. We introduce a general approach to measure nonlinear connectivity through phase coupling: the multi-spectral phase coherence (MSPC). Using simulated data, we compare MSPC with existing phase coupling measures, namely n : m synchronization index and bi-phase locking value. MSPC provides a system description, including (i) the order of the nonlinearity, (ii) the direction of interaction, (iii) the time delay in the system, and both (iv) harmonic and (v) intermodulation coupling beyond the second order; which are only partly revealed by other methods. We apply MSPC to analyze data from a motor control experiment, where subjects performed isotonic wrist flexions while receiving movement perturbations. MSPC between the pe...
52 citations
TL;DR: This pre-clinical study proposes a method for generating a type of model that can evaluate the generalization capabilities of the models and compares the most common solutions in the literature, such as Support Vector Machines, Nearest Neighbors, Decision Trees and Fuzzy Systems.
Abstract: The identification and the modeling of epilepsy convulsions during everyday life using wearable devices would enhance patient anamnesis and monitoring. The psychology of the epilepsy patient penalizes the use of user-driven modeling, which means that the probability of identifying convulsions is driven through generalized models. Focusing on clonic convulsions, this pre-clinical study proposes a method for generating a type of model that can evaluate the generalization capabilities. A realistic experimentation with healthy participants is performed, each with a single 3D accelerometer placed on the most affected wrist. Unlike similar studies reported in the literature, this proposal makes use of [Formula: see text] cross-validation scheme, in order to evaluate the generalization capabilities of the models. Event-based error measurements are proposed instead of classification-error measurements, to evaluate the generalization capabilities of the model, and Fuzzy Systems are proposed as the generalization modeling technique. Using this method, the experimentation compares the most common solutions in the literature, such as Support Vector Machines, [Formula: see text]-Nearest Neighbors, Decision Trees and Fuzzy Systems. The event-based error measurement system records the results, penalizing those models that raise false alarms. The results showed the good generalization capabilities of Fuzzy Systems.
48 citations
TL;DR: Results demonstrated that a higher degree of MS accompanied increased activation of alpha and gamma bands across remote-independent brain processes, covering motor, parietal and occipital areas, which revealed the neurophysiological demand to regulate conflicts among multi-modal sensory systems during MS.
Abstract: Motion sickness (MS) is a common experience of travelers. To provide insights into brain dynamics associated with MS, this study recruited 19 subjects to participate in an electroencephalogram (EEG) experiment in a virtual-reality driving environment. When riding on consecutive winding roads, subjects experienced postural instability and sensory conflict between visual and vestibular stimuli. Meanwhile, subjects rated their level of MS on a six-point scale. Independent component analysis (ICA) was used to separate the filtered EEG signals into maximally temporally independent components (ICs). Then, reduced logarithmic spectra of ICs of interest, using principal component analysis, were decomposed by ICA again to find spectrally fixed and temporally independent modulators (IMs). Results demonstrated that a higher degree of MS accompanied increased activation of alpha (r = 0.421) and gamma (r =0.478) IMs across remote-independent brain processes, covering motor, parietal and occipital areas. This co-modulatory spectral change in alpha and gamma bands revealed the neurophysiological demand to regulate conflicts among multi-modal sensory systems during MS.
42 citations
TL;DR: Estimating multivariate sample entropy over multiple data-driven scales using the multivariate empirical mode decomposition (MEMD) technique shows that multivariate, multiscale sample entropy is a promising technique to discriminate multiple emotional states from EEG recordings.
Abstract: A multivariate sample entropy metric of signal complexity is applied to EEG data recorded when subjects were viewing four prior-labeled emotion-inducing video clips from a publically available, validated database. Besides emotion category labels, the video clips also came with arousal scores. Our subjects were also asked to provide their own emotion labels. In total 30 subjects with age range 19–70 years participated in our study. Rather than relying on predefined frequency bands, we estimate multivariate sample entropy over multiple data-driven scales using the multivariate empirical mode decomposition (MEMD) technique and show that in this way we can discriminate between five self-reported emotions (p < 0.05). These results could not be obtained by analyzing the relation between arousal scores and video clips, signal complexity and arousal scores, and self-reported emotions and traditional power spectral densities and their hemispheric asymmetries in the theta, alpha, beta, and gamma frequency bands. Th...
TL;DR: A simple model of afferent excitatory neurons and interneurons with lateral inhibition is used, reproducing a network topology found in many brain areas from the cerebellum to cortical columns, and the addition of plasticity in intrinsic excitability made the system more robust allowing self-adjustment and rescaling in response to a broad range of input patterns.
Abstract: The majority of operations carried out by the brain require learning complex signal patterns for future recognition, retrieval and reuse. Although learning is thought to depend on multiple forms of long-term synaptic plasticity, the way this latter contributes to pattern recognition is still poorly understood. Here, we have used a simple model of afferent excitatory neurons and interneurons with lateral inhibition, reproducing a network topology found in many brain areas from the cerebellum to cortical columns. When endowed with spike-timing dependent plasticity (STDP) at the excitatory input synapses and at the inhibitory interneuron-interneuron synapses, the interneurons rapidly learned complex input patterns. Interestingly, induction of plasticity required that the network be entrained into theta-frequency band oscillations, setting the internal phase-reference required to drive STDP. Inhibitory plasticity effectively distributed multiple patterns among available interneurons, thus allowing the simultaneous detection of multiple overlapping patterns. The addition of plasticity in intrinsic excitability made the system more robust allowing self-adjustment and rescaling in response to a broad range of input patterns. The combination of plasticity in lateral inhibitory connections and homeostatic mechanisms in the inhibitory interneurons optimized mutual information (MI) transfer. The storage of multiple complex patterns in plastic interneuron networks could be critical for the generation of sparse representations of information in excitatory neuron populations falling under their control.
TL;DR: A system to detect the start and the stop of the gait through electroencephalographic signals has been developed and has been designed in order to be applied in the future to control a lower limb exoskeleton to help stroke or spinal cord injured patients duringThe gait.
Abstract: Walking is for humans an essential task in our daily life. However, there is a huge (and growing) number of people who have this ability diminished or are not able to walk due to motor disabilities. In this paper, a system to detect the start and the stop of the gait through electroencephalographic signals has been developed. The system has been designed in order to be applied in the future to control a lower limb exoskeleton to help stroke or spinal cord injured patients during the gait. The brain-machine interface (BMI) training has been optimized through a preliminary analysis using the brain information recorded during the experiments performed by three healthy subjects. Afterward, the system has been verified by other four healthy subjects and three patients in a real-time test. In both preliminary optimization analysis and real-time tests, the results obtained are very similar. The true positive rates are [Formula: see text] and [Formula: see text] respectively. Regarding the false positive per minute, the values are also very similar, decreasing from 2.66 in preliminary tests to 1.90 in real-time. Finally, the average latencies in the detection of the movement intentions are 794 and 798[Formula: see text]ms, preliminary and real-time tests respectively.
TL;DR: This study applies general indicators of critical transitions to seizure to nearly 300 epileptic seizures collected from human subjects using invasive EEG and points to limited relevance of their early warning signals in the context of human epilepsy observed using intracranial EEG recordings.
Abstract: Complex dynamical systems may exhibit sudden autonomous changes from one state to another. Such changes that occur rapidly in comparison to the regular dynamics have been termed critical transitions. Examples of such phenomena can be found in many complex systems: changes in climate and ocean circulation, changes in wildlife populations, financial crashes, as well as in medical conditions like asthma attacks and depression. It has been recognized that critical transitions, even if they arise in completely different contexts and situations, share several common attributes and also generic early-warning signals that indicate that a critical transition is approaching. In the present study, we review briefly the general characteristics that have been observed in systems prior to critical transitions and apply these general indicators to nearly 300 epileptic seizures collected from human subjects using invasive EEG. Only in about 8% of the patients was evidence of critical transitions found. In the remaining majority of cases no early warning signals that behaved consistently prior to seizures were observed. These results do not rule out the possibility of critical transitions to seizure but point to limited relevance of their early warning signals in the context of human epilepsy observed using intracranial EEG recordings.
TL;DR: The work suggests that ERP- and ERS/ERD-based EEG features may have potential to quantify tactile sensations for medical diagnosis or engineering applications.
Abstract: Psychophysical tests and standardized questionnaires are often used to analyze tactile sensation based on subjective judgment in conventional studies. In contrast with the subjective evaluation, a novel method based on electroencephalography (EEG) is proposed to explore the possibility of quantifying tactile sensation in an objective way. The proposed experiments adopt cutaneous electrical stimulation to generate two kinds of sensations (vibration and pressure) with three grades (low/medium/strong) on eight subjects. Event-related potentials (ERPs) and event-related synchronization/desynchronization (ERS/ERD) are extracted from EEG, which are used as evaluation indexes to distinguish between vibration and pressure, and also to discriminate sensation grades. Results show that five-phase P1–N1–P2–N2–P3 deflection is induced in EEG. Using amplitudes of latter ERP components (N2 and P3), vibration and pressure sensations can be discriminated on both individual and grand-averaged ERP (p < 0.05). The grand-average ERPs can distinguish the three sensations grades, but there is no significant difference on individuals. In addition, ERS/ERD features of mu rhythm (8–13 Hz) are adopted. Vibration and pressure sensations can be discriminated on grand-average ERS/ERD (p < 0.05), but only some individuals show significant difference. The grand-averaged results show that most sensation grades can be differentiated, and most pairwise comparisons show significant difference on individuals (p < 0.05). The work suggests that ERP- and ERS/ERD-based EEG features may have potential to quantify tactile sensations for medical diagnosis or engineering applications.
TL;DR: An algorithm for motor imagery (MI) classification of electrocorticogram (ECoG)-based BCI that employs multi-resolution fractal measures and local binary pattern (LBP) operators to form a combined feature for characterizing an ECoG epoch recording from the right hemisphere of the brain.
Abstract: The feature extraction and classification of brain signal is very significant in brain-computer interface (BCI). In this study, we describe an algorithm for motor imagery (MI) classification of electrocorticogram (ECoG)-based BCI. The proposed approach employs multi-resolution fractal measures and local binary pattern (LBP) operators to form a combined feature for characterizing an ECoG epoch recording from the right hemisphere of the brain. A classifier is trained by using the gradient boosting in conjunction with ordinary least squares (OLS) method. The fractal intercept, lacunarity and LBP features are extracted to classify imagined movements of either the left small finger or the tongue. Experimental results on dataset I of BCI competition III demonstrate the superior performance of our method. The cross-validation accuracy and accuracy is 90.6% and 95%, respectively. Furthermore, the low computational burden of this method makes it a promising candidate for real-time BCI systems.
TL;DR: It is shown that the spatiotemporal LCMV beamformer is at par with state-of-the-art P300 classifiers, but several orders of magnitude faster in training the classifier.
Abstract: The linearly-constrained minimum-variance (LCMV) beamformer is traditionally used as a spatial filter for source localization, but here we consider its spatiotemporal extension for P300 classification. We compare two variants and show that the spatiotemporal LCMV beamformer is at par with state-of-the-art P300 classifiers, but several orders of magnitude faster in training the classifier.
TL;DR: A set of computational retinal microcircuits are defined that can be used as basic building blocks for the modeling of different retina mechanisms and validated the hypothesis that similar processing structures may be repeatedly found in different retina functions.
Abstract: Computational simulations of the retina have led to valuable insights about the biophysics of its neuronal activity and processing principles. A great number of retina models have been proposed to reproduce the behavioral diversity of the different visual processing pathways. While many of these models share common computational stages, previous efforts have been more focused on fitting specific retina functions rather than generalizing them beyond a particular model. Here, we define a set of computational retinal microcircuits that can be used as basic building blocks for the modeling of different retina mechanisms. To validate the hypothesis that similar processing structures may be repeatedly found in different retina functions, we implemented a series of retina models simply by combining these computational retinal microcircuits. Accuracy of the retina models for capturing neural behavior was assessed by fitting published electrophysiological recordings that characterize some of the best-known phenomena observed in the retina: adaptation to the mean light intensity and temporal contrast, and differential motion sensitivity. The retinal microcircuits are part of a new software platform for efficient computational retina modeling from single-cell to large-scale levels. It includes an interface with spiking neural networks that allows simulation of the spiking response of ganglion cells and integration with models of higher visual areas.
TL;DR: An automatic detection algorithm is developed which was able to identify nonscalp-visible IED events for most patients with a low number of false positive detections and represents a proof of concept that IED information for TLE patients is contained in scalp EEG even if they are not visually identifiable and that between subject differences in the IED topology and shape are small enough such that a generic algorithm can be used.
Abstract: Interictal epileptiform discharges (IEDs) are transient neural electrical activities that occur in the brain of patients with epilepsy. A problem with the inspection of IEDs from the scalp electroencephalogram (sEEG) is that for a subset of epileptic patients, there are no visually discernible IEDs on the scalp, rendering the above procedures ineffective, both for detection purposes and algorithm evaluation. On the other hand, intracranially placed electrodes yield a much higher incidence of visible IEDs as compared to concurrent scalp electrodes. In this work, we utilize concurrent scalp and intracranial EEG (iEEG) from a group of temporal lobe epilepsy (TLE) patients with low number of scalp-visible IEDs. The aim is to determine whether by considering the timing information of the IEDs from iEEG, the resulting concurrent sEEG contains enough information for the IEDs to be reliably distinguished from non-IED segments. We develop an automatic detection algorithm which is tested in a leave-subject-out fashion, where each test subject's detection algorithm is based on the other patients' data. The algorithm obtained a [Formula: see text] accuracy in recognizing scalp IED from non-IED segments with [Formula: see text] accuracy when trained and tested on the same subject. Also, it was able to identify nonscalp-visible IED events for most patients with a low number of false positive detections. Our results represent a proof of concept that IED information for TLE patients is contained in scalp EEG even if they are not visually identifiable and also that between subject differences in the IED topology and shape are small enough such that a generic algorithm can be used.
TL;DR: This work presents an automatic parametrization of the brain structure by means of a path generation algorithm based on hidden Markov models (HMMs) that achieves moderate performance, up to 80.3% of accuracy using a single path in differential diagnosis involving Alzheimer-affected subjects versus controls belonging to the Alzheimer's disease neuroimaging initiative (ADNI).
Abstract: The usage of biomedical imaging in the diagnosis of dementia is increasingly widespread. A number of works explore the possibilities of computational techniques and algorithms in what is called computed aided diagnosis. Our work presents an automatic parametrization of the brain structure by means of a path generation algorithm based on hidden Markov models (HMMs). The path is traced using information of intensity and spatial orientation in each node, adapting to the structure of the brain. Each path is itself a useful way to characterize the distribution of the tissue inside the magnetic resonance imaging (MRI) image by, for example, extracting the intensity levels at each node or generating statistical information of the tissue distribution. Additionally, a further processing consisting of a modification of the grey level co-occurrence matrix (GLCM) can be used to characterize the textural changes that occur throughout the path, yielding more meaningful values that could be associated to Alzheimer's disease (AD), as well as providing a significant feature reduction. This methodology achieves moderate performance, up to 80.3% of accuracy using a single path in differential diagnosis involving Alzheimer-affected subjects versus controls belonging to the Alzheimer's disease neuroimaging initiative (ADNI).
TL;DR: A novel iterative regularized algorithm for neural activity reconstruction that explicitly includes spatiotemporal constraints, performing a trade-off between space and time resolutions is presented, and shows that the proposed IRA produces a spatial resolution that is comparable to the one achieved by some widely used sparse-based estimators of brain activity.
Abstract: We present a novel iterative regularized algorithm (IRA) for neural activity reconstruction that explicitly includes spatiotemporal constraints, performing a trade-off between space and time resolutions. For improving the spatial accuracy provided by electroencephalography (EEG) signals, we explore a basis set that describes the smooth, localized areas of potentially active brain regions. In turn, we enhance the time resolution by adding the Markovian assumption for brain activity estimation at each time period. Moreover, to deal with applications that have either distributed or localized neural activity, the spatiotemporal constraints are expressed through [Formula: see text] and [Formula: see text] norms, respectively. For the purpose of validation, we estimate the neural reconstruction performance in time and space separately. Experimental testing is carried out on artificial data, simulating stationary and non-stationary EEG signals. Also, validation is accomplished on two real-world databases, one holding Evoked Potentials and another with EEG data of focal epilepsy. Moreover, responses of functional magnetic resonance imaging for the former EEG data have been measured in advance, allowing to contrast our findings. Obtained results show that the [Formula: see text]-based IRA produces a spatial resolution that is comparable to the one achieved by some widely used sparse-based estimators of brain activity. At the same time, the [Formula: see text]-based IRA outperforms other similar smooth solutions, providing a spatial resolution that is lower than the sparse [Formula: see text]-based solution. As a result, the proposed IRA is a promising method for improving the accuracy of brain activity reconstruction.
TL;DR: Eigenspectra of high frequency BAs in EEG are highly sensitive to emotional hemispheric activations, emotional states are mostly mediated by GBA, pleasant pictures induce the higher cortical activation in contrast to unpleasant pictures, and cognitive activities are necessary for an emotion to occur.
Abstract: In this study, singular spectrum analysis (SSA) has been used for the first time in order to extract emotional features from well-defined electroencephalography (EEG) frequency band activities (BAs) so-called delta (0.5-4 Hz), theta (4-8 Hz), alpha (8-16 Hz), beta (16-32 Hz), gamma (32-64 Hz). These five BAs were estimated by applying sixth-level multi-resolution wavelet decomposition (MRWD) with Daubechies wavelets (db-8) to single channel nonaveraged emotional EEG oscillations of 6 s for each scalp location over 16 recording sites (Fp1, Fp2, F3, F4, F7, F8, C3, C4, P3, P4, T3, T4, T5, T6, O1, O2). Every trial was mediated by different emotional stimuli which were selected from international affective picture system (IAPS) to induce emotional states such as pleasant (P), neutral (N), and unpleasant (UP). Largest principal components (PCs) of BAs were considered as emotional features and data mining approaches were used for the first time in order to classify both three different (P, N, UP) and two contrasting (P and UP) emotional states for 30 healthy controls. Emotional features extracted from gamma BAs (GBAs) for 16 recording sites provided the high classification accuracies of 87.1% and 100% for classification of three emotional states and two contrasting emotional states, respectively. In conclusion, we found the followings: (1) Eigenspectra of high frequency BAs in EEG are highly sensitive to emotional hemispheric activations, (2) emotional states are mostly mediated by GBA, (3) pleasant pictures induce the higher cortical activation in contrast to unpleasant pictures, (4) contrasting emotions induce opposite cortical activations, (5) cognitive activities are necessary for an emotion to occur.
TL;DR: A weight-free training algorithm that relies solely on adjusting the spatiotemporal delivery of neuron firings in order to optimize the network performance is presented, which is demonstrated by training SNNs with hundreds of units to control a virtual insect navigating in an unknown environment.
Abstract: Recent developments in neural stimulation and recording technologies are providing scientists with the ability of recording and controlling the activity of individual neurons in vitro or in vivo, with very high spatial and temporal resolution. Tools such as optogenetics, for example, are having a significant impact in the neuroscience field by delivering optical firing control with the precision and spatiotemporal resolution required for investigating information processing and plasticity in biological brains. While a number of training algorithms have been developed to date for spiking neural network (SNN) models of biological neuronal circuits, exiting methods rely on learning rules that adjust the synaptic strengths (or weights) directly, in order to obtain the desired network-level (or functional-level) performance. As such, they are not applicable to modifying plasticity in biological neuronal circuits, in which synaptic strengths only change as a result of pre- and post-synaptic neuron firings or biological mechanisms beyond our control. This paper presents a weight-free training algorithm that relies solely on adjusting the spatiotemporal delivery of neuron firings in order to optimize the network performance. The proposed weight-free algorithm does not require any knowledge of the SNN model or its plasticity mechanisms. As a result, this training approach is potentially realizable in vitro or in vivo via neural stimulation and recording technologies, such as optogenetics and multielectrode arrays, and could be utilized to control plasticity at multiple scales of biological neuronal circuits. The approach is demonstrated by training SNNs with hundreds of units to control a virtual insect navigating in an unknown environment.
TL;DR: A novel algorithm is developed to detect seizures employing log-Euclidean Gaussian kernel-based sparse representation (SR) in long-term EEG recordings which is more speedy and efficient than traditional seizure detection methods.
Abstract: Epileptic seizure detection plays an important role in the diagnosis of epilepsy and reducing the massive workload of reviewing electroencephalography (EEG) recordings. In this work, a novel algorithm is developed to detect seizures employing log-Euclidean Gaussian kernel-based sparse representation (SR) in long-term EEG recordings. Unlike the traditional SR for vector data in Euclidean space, the log-Euclidean Gaussian kernel-based SR framework is proposed for seizure detection in the space of the symmetric positive definite (SPD) matrices, which form a Riemannian manifold. Since the Riemannian manifold is nonlinear, the log-Euclidean Gaussian kernel function is applied to embed it into a reproducing kernel Hilbert space (RKHS) for performing SR. The EEG signals of all channels are divided into epochs and the SPD matrices representing EEG epochs are generated by covariance descriptors. Then, the testing samples are sparsely coded over the dictionary composed by training samples utilizing log-Euclidean Gaussian kernel-based SR. The classification of testing samples is achieved by computing the minimal reconstructed residuals. The proposed method is evaluated on the Freiburg EEG dataset of 21 patients and shows its notable performance on both epoch-based and event-based assessments. Moreover, this method handles multiple channels of EEG recordings synchronously which is more speedy and efficient than traditional seizure detection methods.
TL;DR: A patient specific method is proposed for seizure detection in the long-term intracranial electroencephalogram (EEG) recordings based on sparse representation with online dictionary learning and elastic net constraint.
Abstract: Automatic seizure detection has played an important role in the monitoring, diagnosis and treatment of epilepsy. In this paper, a patient specific method is proposed for seizure detection in the long-term intracranial electroencephalogram (EEG) recordings. This seizure detection method is based on sparse representation with online dictionary learning and elastic net constraint. The online learned dictionary could sparsely represent the testing samples more accurately, and the elastic net constraint which combines the 11-norm and 12-norm not only makes the coefficients sparse but also avoids over-fitting problem. First, the EEG signals are preprocessed using wavelet filtering and differential filtering, and the kernel function is applied to make the samples closer to linearly separable. Then the dictionaries of seizure and nonseizure are respectively learned from original ictal and interictal training samples with online dictionary optimization algorithm to compose the training dictionary. After that, the test samples are sparsely coded over the learned dictionary and the residuals associated with ictal and interictal sub-dictionary are calculated, respectively. Eventually, the test samples are classified as two distinct categories, seizure or nonseizure, by comparing the reconstructed residuals. The average segment-based sensitivity of 95.45%, specificity of 99.08%, and event-based sensitivity of 94.44% with false detection rate of 0.23/h and average latency of -5.14 s have been achieved with our proposed method.
TL;DR: The proposed GNF, based on the growing neural gas, learns a set of trees so that each tree represents a connected cluster of data, and outperforms some well-known foreground detectors both in quantitative and qualitative terms.
Abstract: In this work, a novel self-organizing model called growing neural forest (GNF) is presented. It is based on the growing neural gas (GNG), which learns a general graph with no special provisions for datasets with separated clusters. On the contrary, the proposed GNF learns a set of trees so that each tree represents a connected cluster of data. High dimensional datasets often contain large empty regions among clusters, so this proposal is better suited to them than other self-organizing models because it represents these separated clusters as connected components made of neurons. Experimental results are reported which show the self-organization capabilities of the model. Moreover, its suitability for unsupervised clustering and foreground detection applications is demonstrated. In particular, the GNF is shown to correctly discover the connected component structure of some datasets. Moreover, it outperforms some well-known foreground detectors both in quantitative and qualitative terms.
TL;DR: New evidence of nonlinear neuronal synchronization in the stretch reflex at the wrist joint with respect to spinal and transcortical loops is provided.
Abstract: Communication between neuronal populations is facilitated by synchronization of their oscillatory activity. Although nonlinearity has been observed in the sensorimotor system, its nonlinear connectivity has not been widely investigated yet. This study investigates nonlinear connectivity during the human stretch reflex based on neuronal synchronization. Healthy participants generated isotonic wrist flexion while receiving a periodic mechanical perturbation to the wrist. Using a novel cross-frequency phase coupling metric, we estimate directional nonlinear connectivity, including time delay, from the perturbation to brain and to muscle, as well as from brain to muscle. Nonlinear phase coupling is significantly stronger from the perturbation to the muscle than to the brain, with a shorter time delay. The time delay from the perturbation to the muscle is 33 ms, similar to the reported latency of the spinal stretch reflex at the wrist. Source localization of nonlinear phase coupling from the brain to the muscle suggests activity originating from the motor cortex, although its effect on the stretch reflex is weak. As such nonlinear phase coupling between the perturbation and muscle activity is dominated by the spinal reflex loop. This study provides new evidence of nonlinear neuronal synchronization in the stretch reflex at the wrist joint with respect to spinal and transcortical loops.
TL;DR: The data analyses support that the N200 potentials induced by the robot image stimuli exhibit recognizable features, which implies that the robot images might provide the subjects with more information to understand the visual stimuli meanings and help them more effectively concentrate on their mental activities.
Abstract: Achieving recognizable visual event-related potentials plays an important role in improving the success rate in telepresence control of a humanoid robot via N200 or P300 potentials. The aim of this research is to intensively investigate ways to induce N200 potentials with obvious features by flashing robot images (images with meaningful information) and by flashing pictures containing only solid color squares (pictures with incomprehensible information). Comparative studies have shown that robot images evoke N200 potentials with recognizable negative peaks at approximately 260 ms in the frontal and central areas. The negative peak amplitudes increase, on average, from 1.2 μV, induced by flashing the squares, to 6.7 μV, induced by flashing the robot images. The data analyses support that the N200 potentials induced by the robot image stimuli exhibit recognizable features. Compared with the square stimuli, the robot image stimuli increase the average accuracy rate by 9.92%, from 83.33% to 93.25%, and the average information transfer rate by 24.56 bits/min, from 72.18 bits/min to 96.74 bits/min, in a single repetition. This finding implies that the robot images might provide the subjects with more information to understand the visual stimuli meanings and help them more effectively concentrate on their mental activities.
TL;DR: This work presents an online spike-sorting framework that uses feature normalization and weighting to maximize the distinctiveness between different spike shapes and could substantially improve the quality of microelectrode-based data evaluation for research and clinical application.
Abstract: Extracellular neuronal microelectrode recordings can include action potentials from multiple neurons. To separate spikes from different neurons, they can be sorted according to their shape, a procedure referred to as spike-sorting. Several algorithms have been reported to solve this task. However, when clustering outcomes are unsatisfactory, most of them are difficult to adjust to achieve the desired results. We present an online spike-sorting framework that uses feature normalization and weighting to maximize the distinctiveness between different spike shapes. Furthermore, multiple criteria are applied to either facilitate or prevent cluster fusion, thereby enabling experimenters to fine-tune the sorting process. We compare our method to established unsupervised offline (Wave_Clus (WC)) and online (OSort (OS)) algorithms by examining their performance in sorting various test datasets using two different scoring systems (AMI and the Adamos metric). Furthermore, we evaluate sorting capabilities on intra-operative recordings using established quality metrics. Compared to WC and OS, our algorithm achieved comparable or higher scores on average and produced more convincing sorting results for intra-operative datasets. Thus, the presented framework is suitable for both online and offline analysis and could substantially improve the quality of microelectrode-based data evaluation for research and clinical application.
TL;DR: It is demonstrated that this stochastic resonance arises in realistic cortical neural systems described by the Izhikevich neuron model and the characteristics of typical spiking patterns of regular spiking, intrinsically bursting and chattering experimentally observed in the cortex are compared.
Abstract: Synaptic plasticity is widely recognized to support adaptable information processing in the brain. Spike-timing-dependent plasticity, one subtype of plasticity, can lead to synchronous spike propagation with temporal spiking coding information. Recently, it was reported that in a noisy environment, like the actual brain, the spike-timing-dependent plasticity may be made efficient by the effect of stochastic resonance. In the stochastic resonance, the presence of noise helps a nonlinear system in amplifying a weak (under barrier) signal. However, previous studies have ignored the full variety of spiking patterns and many relevant factors in neural dynamics. Thus, in order to prove the physiological possibility for the enhancement of spike-timing-dependent plasticity by stochastic resonance, it is necessary to demonstrate that this stochastic resonance arises in realistic cortical neural systems. In this study, we evaluate this stochastic resonance phenomenon in the realistic cortical neural system described by the Izhikevich neuron model and compare the characteristics of typical spiking patterns of regular spiking, intrinsically bursting and chattering experimentally observed in the cortex.