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Showing papers in "Plant Ecology & Diversity in 2014"


Journal ArticleDOI
TL;DR: In this paper, a new proxy for water table depth, the terrain height above nearest drainage (HAND), was tested as a predictor of composition in trees, lianas, palms, shrubs, and herbs.
Abstract: Background: Plant composition changes with topography and edaphic gradients that correlate with soil-water and nutrient availability. Data on soil water for the Amazon Basin are scarce, limiting the possibility of distinguishing between soil and soil-water influences on plant composition. Aim: We tested a new proxy for water table depth, the terrain height above nearest drainage (HAND), as a predictor of composition in trees, lianas, palms, shrubs, and herbs and compared HAND to conventional measures of height above sea level (HASL) and horizontal distances from nearest drainage (HDND). Methods: Plant-species composition in 72 plots distributed across 64 km2 of lowland evergreen terra firme forest was summarised using non-metric multidimensional scaling (NMDS). NMDS scores were regressed against estimates of HAND, HASL and HDND. Results: Plant composition was highly correlated with the vertical distance from water table, capturing up to 82% of variation. All life forms showed highest turnover rates in the...

121 citations


Journal ArticleDOI
TL;DR: In this paper, the authors presented the carbon budget of two forest plots in Tambopata in south-eastern Peru, western Amazonia, and measured the major components of net primary production and total autotrophic respiration over 3-6 years.
Abstract: Background: The forests of western Amazonia are known to be more dynamic that the better-studied forests of eastern Amazonia, but there has been no comprehensive description of the carbon cycle of a western Amazonian forest. Aims: We present the carbon budget of two forest plots in Tambopata in south-eastern Peru, western Amazonia. In particular, we present, for the first time, the seasonal variation in the detailed carbon budget of a tropical forest. Methods: We measured the major components of net primary production (NPP) and total autotrophic respiration over 3–6 years. Results: The NPP for the two plots was 15.1 ± 0.8 and 14.2 ± 1.0 Mg C ha−1 year−1, the gross primary productivity (GPP) was 35.5 ± 3.6 and 34.5 ± 3.5 Mg C ha−1 year−1, and the carbon use efficiency (CUE) was 0.42 ± 0.05 and 0.41 ± 0.05. NPP and CUE showed a large degree of seasonality. Conclusions: The two plots were similar in carbon cycling characteristics despite the different soils, the most notable difference being high allocation ...

103 citations


Journal ArticleDOI
TL;DR: In this article, the authors analyzed the relationship between the tropical Pacific Southern Oscillation Index (SOI) and water levels for 1968-2010 and found that SOI explained 32% of the variation in annual low water level.
Abstract: Background: Large fire scars were detected in floodplain forests of the middle Rio Negro in dry years of the 1990s, using satellite data. Aim: To relate fire years and river level anomalies to the Tropical Pacific Southern Oscillation Index (SOI); to measure fire damage and post-fire succession rate. Methods: We analysed the relationship between the SOI and water levels for 1968–2010. In Landsat images of the 1990s we determined fire scar ages. Using QuickBird images, we measured forest cover loss in 36 of these scars, covering 873 ha. This was validated by field measurements of tree mortality in 15 scars. As a metric of post-fire succession, we compared change in the Enhanced Vegetation Index (EVI) in 10 large floodplain fire scars and 12 terra firme slash-and-burn fallows. Results: SOI explained 32% of the variation in annual low water level. Forest cover loss in the 36 burn scars was 88% ± 8% (mean ± SD), range 67–98%. Post-fire tree mortality was 91%, ±8%, range 75–100%. Correlation between cover loss...

98 citations


Journal ArticleDOI
TL;DR: In this paper, the authors compare the dynamics and above-ground biomass of vegetation located in the zone of transition (ZOT) with core Amazon forest and determine how ZOT dynamics differ within vegetation types for different tree diameter classes.
Abstract: Background: The zone of transition (ZOT) between the Cerrado and the Amazon forest in southern Amazonia represents a unique and rapidly shrinking area due to land-use change. Aims: To compare the dynamics and above-ground biomass of vegetation located in the ZOT with core Amazon forest and to determine how ZOT dynamics differ within vegetation types for different tree diameter classes. Methods: Censuses of trees were conducted in seven plots in monodominant forest, semi-deciduous seasonal forest, gallery forest, cerrado sensu stricto and cerradao, in north-eastern Mato Grosso, Brazil from 1996 to 2010, including data for the 2005 drought year. Separate analyses of stem dynamics and biomass were carried out for two different diameter (d) classes: 5 ≤ d < 10 cm and d ≥ 10 cm. Results: For trees with d ≥ 10 cm the average mortality rate was 2.8% year−1, with an estimated above-ground dry biomass of 210 Mg ha−1. Trees with 5 ≤ d < 10 cm constituted only a small fraction of the total biomass store (ca. 10 Mg h...

94 citations


Journal ArticleDOI
TL;DR: In this article, the authors analyzed the spatial patterns of forest structure, above-ground biomass and composition from 76 permanent plots, ranging from lowland Amazonian rain forest to high-elevation cloud forests in Ecuador, Peru, and Bolivia.
Abstract: Background: The Amazon to Andes transition zone provides large expanses of relatively pristine forest wilderness across environmental gradients. Such elevational gradients are an excellent natural laboratory for establishing long-term interactions between forest ecosystems and environmental parameters, which is valuable for understanding ecosystem responses to environmental change. Aims: This study presents data on elevational trends of forest structure (biomass, basal area, height, stem density), species richness, and composition from six elevational transects in the Andes. Methods: We analysed the spatial patterns of forest structure, above-ground biomass and composition from 76 permanent plots, ranging from lowland Amazonian rain forest to high-elevation cloud forests in Ecuador, Peru, and Bolivia. Results: Forest above-ground woody biomass stocks ranged from 247 Mg ha−1 (Peru, 210 m) to 86 Mg ha−1 (Peru, 3450 m), with significantly decreasing trends of tree height and biomass and an increasing trend o...

92 citations


Journal ArticleDOI
TL;DR: In this paper, the authors presented the first comprehensive data on the production, allocation and cycling of carbon for two high elevation (ca 3000 m) tropical montane cloud forest plots in the Kosnipata Valley, Peruvian Andes.
Abstract: Background: The slopes of the eastern Andes harbour some of the highest biodiversity on Earth and a high proportion of endemic species However, there have been only a few and limited descriptions of carbon budgets in tropical montane forest regions Aims: We present the first comprehensive data on the production, allocation and cycling of carbon for two high elevation (ca 3000 m) tropical montane cloud forest plots in the Kosnipata Valley, Peruvian Andes Methods: We measured the main components and seasonal variation of net primary productivity (NPP), autotrophic (R a) and heterotrophic (R h) respiration to estimate gross primary productivity (GPP) and carbon use efficiency (CUE) in two 1-ha plots Results: NPP for the two plots was estimated to be 705 ± 039 and 804 ± 047 Mg C ha−1 year−1, GPP to be 2233 ± 223 and 2682 ± 297 Mg C ha−1 year−1 and CUE was 032 ± 004 and 030 ± 004 Conclusions: We found strong seasonality in NPP and moderate seasonality of R a, suggesting that forest NPP is dri

71 citations


Journal ArticleDOI
TL;DR: In this article, the authors described the carbon cycle in a 1 ha rainforest plot subjected to 8-10 consecutive years of ca 50% through-fall reduction (TFR) and compared these results with those from a nearby, unmodified control plot in eastern Amazonia.
Abstract: Background: There is much interest in how the Amazon rainforest may respond to future rainfall reduction However, there are relatively few ecosystem-scale studies to inform this debate Aims: We described the carbon cycle in a 1 ha rainforest plot subjected to 8–10 consecutive years of ca 50% through-fall reduction (TFR) and compare these results with those from a nearby, unmodified control plot in eastern Amazonia Methods: We quantified the components of net primary productivity (NPP), autotrophic (R a) and heterotrophic respiration, and estimate gross primary productivity (GPP, the sum of NPP and R a) and carbon-use efficiency (CUE, the ratio of NPP/GPP) Results: The TFR forest exhibited slightly lower NPP but slightly higher R a, such that forest CUE was 029 ± 004 on the control plot but 025 ± 003 on the TFR plot Compared with four years earlier, TFR plot leaf area index and small tree growth recovered and soil heterotrophic respiration had risen Conclusions: This analysis tested and extended

59 citations


Journal ArticleDOI
TL;DR: In this article, the authors present results on the production, allocation and cycling of carbon for two mid-elevation (1500-1750 m) tropical montane cloud forest plots in San Pedro, Kosnipata Valley, Peru.
Abstract: Background: Tropical montane cloud forests (TMCF) are unique ecosystems with high biodiversity and large carbon reservoirs. To date there have been limited descriptions of the carbon cycle of TMCF. Aims: We present results on the production, allocation and cycling of carbon for two mid-elevation (1500–1750 m) tropical montane cloud forest plots in San Pedro, Kosnipata Valley, Peru. Methods: We repeatedly recorded the components of net primary productivity (NPP) using biometric measurements, and autotrophic (R a) and heterotrophic (R h) respiration, using gas exchange measurements. From these we estimated gross primary productivity (GPP) and carbon use efficiency (CUE) at the plot level. Results: The plot at 1500 m was found very productive, with our results comparable with the most productive lowland Amazonian forests. The plot at 1750 m had significantly lower productivity, possibly because of greater cloud immersion. Both plots had similar patterns of NPP allocation, a substantial seasonality in NPP com...

55 citations


Journal ArticleDOI
TL;DR: In this article, the relationship between soil physical constraints and tree and palm basal area was analyzed to understand how the physical properties of soil are directly or indirectly related to the structure and physiognomy of lowland Amazonian forests.
Abstract: Background: Trees and arborescent palms adopt different rooting strategies and responses to physical limitations imposed by soil structure, depth and anoxia. However, the implications of these differences for understanding variation in the relative abundance of these groups have not been explored. Aims: We analysed the relationship between soil physical constraints and tree and palm basal area to understand how the physical properties of soil are directly or indirectly related to the structure and physiognomy of lowland Amazonian forests. Methods: We analysed inventory data from 74 forest plots across Amazonia, from the RAINFOR and PPBio networks for which basal area, stand turnover rates and soil data were available. We related patterns of basal area to environmental variables in ordinary least squares and quantile regression models. Results: Soil physical properties predicted the upper limit for basal area of both trees and palms. This relationship was direct for palms but mediated by forest turnover ra...

54 citations


Journal ArticleDOI
TL;DR: In this paper, the authors report on the first study of productivity, allocation and carbon cycling from a terra preta plot in eastern Amazonia (Caxiuana, Para, Brazil), and contrast its dynamics with a nearby plot on infertile soil (ferralsols).
Abstract: Background: Terra preta do indio or ‘dark earth’ soils formed as a result of a long-term addition of organic matter by indigenous peoples in Amazonia. Aims: Here we report on the first study of productivity, allocation and carbon cycling from a terra preta plot in eastern Amazonia (Caxiuana, Para, Brazil), and contrast its dynamics with a nearby plot on infertile soil (ferralsols). Methods: We determined total net primary production (NPP) for fine roots, wood, and canopy and total autotrophic respiration (rhizosphere, wood, and canopy respiration) from two 1-ha plots on contrasting soils. Results: Both gross primary productivity (GPP) (35.68 ± 3.65 vs. 32.08 ± 3.46 Mg C ha−1 year−1) and carbon use efficiency (CUE) (0.44 ± 0.06 vs. 0.42 ± 0.05) were slightly higher at the terra preta plot. Total NPP (15.77 ± 1.13 Mg C ha−1 year−1 vs. 13.57 ± 0.60 Mg C ha−1 year−1) and rates of fine root production (6.41 ± 1.08 vs. 3.68 ± 0.52 Mg C ha−1 year−1) were also greater at the terra preta plot vs. the tower plot. C...

54 citations


Journal ArticleDOI
TL;DR: In this article, changes in woody vegetation were monitored across chronosequences of abandoned pastures and abandoned clearcuts in order to compare their successional patterns in the Amazon Basin.
Abstract: Background: Plant succession and community assembly following different land-use histories in the Amazon Basin are poorly understood. Aims: Changes in woody vegetation were monitored across chronosequences of abandoned pastures and abandoned clearcuts in order to compare their successional patterns. Methods: In chronosequences, initially 5–19 years old in abandoned clearcuts and 2–11 years old in abandoned pastures, trees (≥ 3 cm dbh) were tagged and recruitment and mortality recorded annually for 12 years. Results: Stem densities exhibited no significant trend during the first 25 years of succession regardless of land-use history. Basal area in abandoned clearcuts increased rapidly in the first decade, outpacing accumulation in abandoned pastures, although basal area on the two pathways converged at 25 years post-abandonment. Transects in abandoned pastures were much more variable in stem density and basal area than those in abandoned clearcuts, reflecting cohort growth and thinning by the dominant genus...

Journal ArticleDOI
TL;DR: In this article, the invasion process of Acacia mangium in savanna areas adjacent to large-scale forestry plantations in north-eastern Roraima State, Brazilian Amazonia was investigated.
Abstract: Background : No studies have examined the invasion of exotic species used for forestry purposes in the savannas of the Brazilian Amazonia. Aims : We investigated the invasion process of Acacia mangium in savanna areas adjacent to large-scale forestry plantations in north-eastern Roraima State, Brazilian Amazonia. Methods : A tree inventory to record the presence of all A. mangium and native tree individuals was carried out in of 14 plots (each 50 m in width and 1500 m in length) established at five plantation sites. Biometric measurements were taken for all individuals to identify their structure and maturity. Distance categories were created for determining frequency of occurrence in 100 m sections along the plots for all individuals. Correlations and goodness-of-fit tests for discrete data ordered in categories were applied to verify the occurrence of A. mangium plants in relation to distance from the plantation. Results : Individuals of A. mangium were dispersed up to 900 m from the plantation edge 8–9...

Journal ArticleDOI
TL;DR: In this article, the impact of repeated low intensity, understorey fire on carbon cycling in a semi-deciduous, seasonally dry tropical forest on infertile soil in south-eastern Amazonia was quantified.
Abstract: Background: The impact of fire on carbon cycling in tropical forests is potentially large, but remains poorly quantified, particularly in the locality of the transition forests that mark the boundaries between humid forests and savannas. Aims: To present the first comprehensive description of the impact of repeated low intensity, understorey fire on carbon cycling in a semi-deciduous, seasonally dry tropical forest on infertile soil in south-eastern Amazonia. Methods: We compared an annually burnt forest plot with a control plot over a three-year period (2009–2011). For each plot we quantified the components of net primary productivity (NPP), autotrophic (R a) and heterotrophic respiration (R h), and estimated total plant carbon expenditure (PCE, the sum of NPP and R a) and carbon-use efficiency (CUE, the quotient of NPP/PCE). Results: Total NPP and R a were 15 and 4% lower on the burnt plot than on the control, respectively. Both plots were characterised by a slightly higher CUE of 0.36–0.39, compared to...

Journal ArticleDOI
TL;DR: In this paper, the authors compared the full carbon cycle for two 1-ha forest plots that straddle the ecotone between humid forest and dry forest in Amazonia, ca. 100 km from Santa Cruz, Bolivia.
Abstract: Background: The dry transitional forests of the southern Amazonia have received little attention from a carbon cycling and ecosystem function perspective, yet they represent ecosystems that may be impacted by global climate change in the future. Aims: To compare the full carbon cycle for two 1-ha forest plots that straddle the ecotone between humid forest and dry forest in Amazonia, ca. 100 km from Santa Cruz, Bolivia. Methods: 2.5 years of measurements of the components of net primary production (NPP) and autotrophic respiration were collected. Results: Total NPP was 15.5 ± 0.89 Mg C ha−1 year−1 at the humid site and 11.27 ± 0.68 Mg C ha−1 year−1 at the dry site; a total Gross Primary Production (GPP) of 34.14 ± 2.92 Mg C ha−1 year−1 and 26.88 ± 2.70 Mg C ha−1 year−1 at the two sites. Carbon use efficiency for both sites was higher than reported for other Amazonian forests (0.45 ± 0.05 and 0.42 ± 0.05). Conclusions: Drier soil conditions selected for the dry deciduous tree species which had higher leaf p...

Journal ArticleDOI
TL;DR: In this paper, the extent to which leguminous trees in tropical forests fix nitrogen is unclear, and the authors aimed to determine factors that explain variation in foliar δ15N (δ15NF) for Amazon forest trees.
Abstract: Background: Patterns in tropical forest nitrogen cycling are poorly understood. In particular, the extent to which leguminous trees in these forests fix nitrogen is unclear. Aims: We aimed to determine factors that explain variation in foliar δ15N (δ15NF) for Amazon forest trees, and to evaluate the extent to which putatively N2-fixing Fabaceae acquire nitrogen from the atmosphere. Methods: Upper-canopy δ15NF values were determined for 1255 trees sampled across 65 Amazon forest plots. Along with plot inventory data, differences in δ15NF between nodule-forming Fabaceae and other trees were used to estimate the extent of N2 fixation. Results: δ15NF ranged from −12.1‰ to +9.3‰. Most of this variation was attributable to site-specific conditions, with extractable soil phosphorus and dry-season precipitation having strong influences, suggesting a restricted availability of nitrogen on both young and old soils and/or at low precipitation. Fabaceae constituted fewer than 10% of the sampled trees, and only 36% we...

Journal ArticleDOI
TL;DR: These findings reinforce the notion that the dry season in eastern Amazonia is not associated with significant limitations in leaf-level photosynthesis, and suggest limited seasonal leaf acclimation.
Abstract: Background: Global changes are challenging the equilibrium in the Amazon. Understanding how that biome responds to seasonality in water availability is essential to build scenarios of ecosystem functioning in the near future. Aims: Our aim was to test for seasonal variations in leaf traits related to primary productivity. Methods: Chemical composition, mass to area ratio and photosynthetic response curves to light and CO2 and of stomatal conductance (gs) to leaf-to-air water pressure deficit (ν) were determined from leaves of Amazonian trees and lianas. Results: Weak responses of gs to ν suggested limited stomatal control over transpiration. Dry season stomatal limitation of photosynthesis was not a common feature as only one individual studied (out of 14) exhibited concomitant decreases in light saturated photosynthetic rate (ASat )a ndgs (measured during ASat) associated with the dry season. Furthermore, 75% of the individuals evaluated did not show decreased photosynthetic capacity (Vcmax) during the dry season, suggesting limited seasonal leaf acclimation. Grouped analyses indicated that most parameters evaluated remained constant across seasons. The exceptions were leaf nitrogen and its isotopic signature, and the integrated stomatal sensitivity to light, CO2 and ν. Conclusions: These findings reinforce the notion that the dry season in eastern Amazonia is not associated with significant limitations in leaf-level photosynthesis.

Journal ArticleDOI
TL;DR: Successional age and light availability affect seedlings growth differently in the two successional pathways, and in Vismia-dominated secondary forests seedling growth is limited by factors other than light.
Abstract: Background : In central Amazonia, previous low intensity land use engenders succession dominated by Cecropia spp. which proceeds at high rates; however, at higher intensity of use succession is arrested and dominated by Vismia spp. over the long-term. Factors driving these two successional pathways are unknown. Aims : We aimed to elucidate seedling growth under the two alternative successional pathways. Methods : We experimentally determined the effects of successional age and photosynthetically active radiation (PAR) on relative height growth (RHG) of nine species of shade-tolerant tree seedlings in secondary forests dominated by Cecropia and Vismia, varying in age from 1–20 years. Results : In Cecropia-dominated successions, seedling RHG decreased with increasing successional age and with associated decreasing PAR. In Vismia-dominated successions, RHG was independent of successional age and PAR, and PAR did not change with successional age, being always higher than in Cecropia stands. The RHG of seedlin...

Journal ArticleDOI
TL;DR: In this paper, the authors identify how forest structure and tree species composition change in response to fire and to identify fire-tolerant species, and determine which traits or characteristics are associated with fire tolerance.
Abstract: Background: In tropical montane cloud forests (TMCFs) fires can be a frequent source of disturbance near the treeline. Aims: To identify how forest structure and tree species composition change in response to fire and to identify fire-tolerant species, and determine which traits or characteristics are associated with fire tolerance. Methods: Shifts in forest structure and diversity were assessed on 15 paired plots in burnt and unburnt (control) forests, along a fire chronosequence. Species were classified as fire-sensitive, fire survivors or fire thrivers, using a fire tolerance index. Regression and tree analyses were used to determine which traits contributed to the fire tolerance of species. Results: There were more small- and medium-sized trees in the burnt plots independent of time since the last fire. There were shifts in family importance value and in species diversity among the plots. Of the 73 species analysed there were 39 fire-sensitive species, 19 fire survivors and 14 fire thrivers. Sprouting...

Journal ArticleDOI
TL;DR: On low-fertility soils, habitat quality may outweigh habitat patchiness as a filter on the availability of dispersal syndromes, potentially adding to the vulnerability of such communities to stochastic extinctions and global change.
Abstract: Background: It is critical to understand the ecological factors shaping seed dispersal in plant communities in order to predict their fate in the face of global change. Communities restricted to patchy habitats may contain more species with ‘directed’ dispersal syndromes that facilitate successful seed dispersal to other patches; however, habitat quality may constrain the presence of and efficiency of dispersal syndromes found within those habitats.Aims: The aim of this study was to hypothesise that if habitat patchiness is an important filter on dispersal syndromes, ‘directed’ vertebrate dispersal should be more prevalent in serpentine habitats because of their patchiness. Alternatively, if habitat quality is more important, wind dispersal should be more prevalent in serpentine habitats because of their low fertility.Methods: Using three datasets representing grassland, chaparral and forest vegetation types, we analysed differences in the composition of dispersal syndromes (vertebrate, wind, pass...

Journal ArticleDOI
TL;DR: The importance of the Amazonian and Andean rain forests in the Earth System cannot be overstated as mentioned in this paper, and they store ca. 100 billion tonnes of carbon in their biomass.
Abstract: The importance of Amazonian and Andean rain forests in the Earth System cannot be overstated. They store ca. 100 billion tonnes of carbon in their biomass (Malhi et al. 2006; Saatchi et al. 2007), ...

Journal ArticleDOI
TL;DR: In this paper, the authors presented a comprehensive description of the carbon cycle of two 1 ha forests plots in Allpahuayo, near Iquitos, Peru, one on an occasionally inundated alisol/gleysol landscape, the other on an arenosol (sandy soil).
Abstract: Background: The forests of north-west Amazonia are characterised by the highest levels of tree diversity in the world, high rainfall and relatively fertile soils. Aims: Here we present a comprehensive description of the carbon cycle of two 1 ha forests plots in Allpahuayo, near Iquitos, Peru, one on an occasionally inundated alisol/gleysol landscape, the other on an arenosol (sandy soil). Methods: Data on the components of net primary productivity (NPP) and autotrophic respiration were collected over the period 2009–2011, and summed to estimate gross primary productivity (GPP) and carbon use efficiency (CUE). Results: Overall, these forests showed high values of GPP (39.05 ± 4.59 and 41.88 ± 4.60 Mg C ha−1 year−1). Despite the lack of a dry season, the forests showed distinct seasonality in tree growth, litterfall, flowering and fine root productivity. This showed that tropical forests with little seasonality in water supply can still exhibit distinct seasonality in NPP and carbon use, apparently synchron...

Journal ArticleDOI
TL;DR: In this article, the authors analyzed woody debris (WD) and other above-ground fluxes in mature tropical forest plots along an elevational gradient (210-3025m above sea level) in southern Peru.
Abstract: Background: Dead biomass, including woody debris (WD), is an important component of the carbon cycle in tropical forests. Aims: This study analyses WD (>2 cm) and other above-ground fluxes in mature tropical forest plots along an elevational gradient (210–3025 m above sea level) in southern Peru. Methods: This work was based on inventories of fine and coarse WD (FWD and CWD, respectively), above-ground biomass, and field-based and experimental respiration measurements. Results: Total WD stocks ranged from 6.26 Mg C ha−1 at 3025 m to 11.48 Mg C ha−1 at 2720 m. WD respiration was significantly correlated with moisture content (P < 0.001; R 2 = 0.25), temperature (P < 0.001; R 2 = 0.12) and wood density (P < 0.001; R 2 = 0.16). Controlled experiments showed that both water content and temperature increased respiration rates of individual WD samples. The full breadth of the temperature sensitivity coefficient, or Q 10, estimates, ranging from 1.14–2.13, was low compared to other studies. In addition, temperat...

Journal ArticleDOI
TL;DR: In this paper, the authors surveyed two large forest inventory plots of 114 and 53 ha of the Tapajos National Forest (TNF) in the Brazilian Amazon during 2008 and 2009, respectively.
Abstract: Background: The dynamics of gaps plays a role in the regimes of tree mortality, production of coarse woody debris (CWD) and the variability of light in the forest understory. Aims: To quantify the area affected by, and the carbon fluxes associated with, natural gap-phase disturbances in a tropical lowland evergreen rain forest by use of ground measurements and high-resolution satellite images. Methods: We surveyed two large forest inventory plots of 114 and 53 ha of the Tapajos National Forest (TNF) in the Brazilian Amazon during 2008 and 2009, respectively. We mapped all gaps and collected data on light availability, CWD stocks and tree mortality in the field. Gap location, canopy openness (CO) and leaf area index (LAI) estimated in the field were compared with two IKONOS–2 high-resolution satellite images acquired at approximately the time of the field measurements. Results: In the two large plots (167 ha total area) we found 96 gaps. The gaps represented 1.42% of the total area and gaps <1-year-old acc...

Journal ArticleDOI
TL;DR: In this article, the nature and extent of plant compositional changes in liverwort heath over 50 years and relate this to environmental change drivers are assessed. But detailed insights into its dynamics are lacking.
Abstract: Background: Liverwort heath is considered in Scotland to be one of the vegetation types most vulnerable to environmental change, yet detailed insights into its dynamics are lacking.Aims: To assess the nature and extent of plant compositional changes in liverwort heath over 50 years and relate this to environmental change drivers.Methods: Vegetation plots previously recorded 20 and 50 years ago were re-surveyed to assess changes in species composition, plot-level species richness and between-plot variability, using several β-diversity indices and partitioning. The environmental indicator values of the species that showed most change were used to identify the environmental drivers of change.Results: Liverwort heath in north-west Scotland has undergone compositional changes over 50 years, becoming more heterogeneous, and losing some of its distinct character. Dwarf shrubs and specialist liverworts have decreased, while graminoids have increased. Partitioning of change in β diversity indicated that mainly cha...

Journal ArticleDOI
TL;DR: In this article, the authors investigate Amazon forest dynamics and test for compositional changes between 1985 and 2005 across different plant groups, including dry-affiliate, climate-generalist and wet affiliate.
Abstract: Background: Climate change is driving ecosystem shifts, which has implications for tropical forest system function and productivity. Aim: To investigate Amazon forest dynamics and test for compositional changes between 1985 and 2005 across different plant groups. Methods: Tree census data from 46 long-term RAINFOR forest plots in Amazonia for three climate-functional groups were used: dry-affiliate, climate-generalist and wet affiliate. Membership of each group was ascribed at genus level from the distribution of individuals across a wet–dry gradient in Amazonia, and then used to determine whether the proportions of these functional groups have changed over time, and the direction of any change. Results: In total, 91 genera, representing 59% of the stems and 18% of genera in the plots, were analysed. Wet-affiliates tended to move from a state of net basal area gain towards dynamic equilibrium, defined as where gain ≈ loss, governed by an increase in loss rather than a decrease in growth and mainly driven ...

Journal ArticleDOI
TL;DR: In this article, electrical conductivity (EC) and dissolved organic carbon (DOC) were measured in a blackwater stream and determined whether it is possible to make predictions of DOC concentration in such streams using continuous measurements of EC alone.
Abstract: Background: Dissolved organic carbon (DOC) is a major component of the total carbon in headstreams in Amazonia. Long-term measurements of DOC concentration are difficult to obtain in remote areas of Amazonia. Aims: To take measurements of electrical conductivity (EC) and DOC concentration in a blackwater stream and to determine whether it is possible to make predictions of the DOC concentration in such streams using continuous measurements of EC alone. Methods: In a forested area, DOC concentration and EC were measured in groundwater along a topographic gradient at weekly intervals over a period of 8 months, and in stream water at half-hourly intervals over 2 years. Results: Strong and positive relationships between EC and DOC concentration were found in stream water in wet (r 2 = 0.99) and dry periods (r 2 = 0.97). It was thus possible to produce two equations that could be used to derive DOC concentration values from continuous measurements of EC. Both DOC concentration and EC varied according to the di...

Journal ArticleDOI
TL;DR: Differences in diversity patterns between serpentine and non-serpentine communities in the eastern Mediterranean are influenced by soil chemistry rather than biomass production.
Abstract: Background: Diversity patterns of plant communities are related to the environment, including productivity and patchiness of habitat.Aims: To determine differences in diversity patterns between serpentine and non-serpentine communities.Methods: A two-year study was conducted in native eastern Mediterranean grasslands. For each year 40 0.25 m2 plots were sampled across four pairs of sites, each of which contained a serpentine and an adjacent non-serpentine plant community. Alpha and beta diversity (variation in species composition among plots within localities), species composition and biomass production were determined. Total soil elemental concentrations and pH were also measured.Results: Serpentine habitats were shown to support a lower alpha diversity relative to non-serpentine habitatas on a per plot basis. Differences in alpha diversity between the two substrates were associated with variation in soil chemistry rather than above-ground biomass production. Serpentine habitats also exhibited lower beta...

Journal ArticleDOI
TL;DR: It is suggested that herbarium specimens could be included in SLA measurements, provided shrinkage is quantified and is less than the wide range of between-species variations already documented.
Abstract: Background: Specific leaf area (SLA) is a key plant functional trait, related to leaf life span, nutrient concentrations and photosynthetic rates, among other factors. However, a limiting factor in measuring these traits is that they are taken from fresh leaves. If accurate SLA measurements could be extracted from dried herbarium specimens, values for many more species could be rapidly included in large trait databases. Aims: To determine whether artificial drying of leaves could influence subsequent calculations of SLA compared to calculations using fresh leaf area. Methods: Using data from 449 leaves from 123 tropical species, we compared leaf area and SLA of fresh leaves with leaf area and SLA of the same leaves following standard pressing and drying procedures. Drying was carried out in the field using an electric heater. Results: We found a significant decrease in leaf area following pressing and artificial drying (mean decrease = 8%), but that this effect was less in larger leaves. This decrease in ...

Journal ArticleDOI
TL;DR: This review focuses on whether plant diversity on serpentine soils correlates with the below ground diversity of mycorrhizal fungi, and investigates the additive response to multiple factors, described as the serpentine syndrome, which may explain part of the response by fungi.
Abstract: Background: Serpentine ecosystems support different, often unique, plant communities; however, we know little about the soil organisms that associate with these ecosystems. Mycorrhizas, mutualistic symbioses between fungi and roots, are critical to nutrient cycling and energy exchange below ground.Aims: We address three hypotheses: H1, diversity of mycorrhizal fungi in serpentine soils mirrors above-ground plant diversity; H2, the morphology of mycorrhizas and fungi on serpentine soils differs from that on non-serpentine; and H3, mycorrhizal fungal communities of the same or closely related hosts differ between serpentine and non-serpentine soils.Methods: This review focuses on whether plant diversity on serpentine soils correlates with the below ground diversity of mycorrhizal fungi.Results: Studies show that plants and fungi formed abundant ectomycorrhizal and arbuscular mycorrhizal symbioses on and off serpentine soils. No serpentine-endemic fungi were identified. Molecular analyses indicate distinct s...

Journal ArticleDOI
TL;DR: In this article, the relationship among richness, diversity, abundance and distribution of liana species in different vegetation formation types along a gradient within a savanna-forest transition zone in central Brazil was determined.
Abstract: Background: Lianas strongly influence tropical forest dynamics and diversity. Aims: To determine the relationship among richness, diversity, abundance and distribution of liana species in different vegetation formation types along a gradient within a savanna–forest transition zone in central Brazil. Methods: All liana species were identified and their girth measurements (≥5 cm) taken in one 1 ha plot at each of 15 sites that encompassed a range of vegetation types: dystrophic cerradao (tall closed woodland cerrado), gallery forest, flooded forest, semi-deciduous seasonal forest (one monodominant) and evergreen forest. We evaluated and compared the communities in terms of richness, community diversity (Shannon's H’), equitability (Hurlbert's, PIE), and the distribution of liana abundance. Results: In total, 1467 individual lianas belonging to 65 species, 41 genera and 17 families were recorded in the 15 ha sampled. The value of H’ varied from 0–2.47, and that of PIE ranged from 0–0.90. While flooded forest...