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2-Thiouracil intersystem crossing photodynamics studied by wavelength-dependent photoelectron and transient absorption spectroscopies

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TLDR
In this article, a synergistic approach based on time-resolved photoelectron spectroscopy (TRPES), timeresolved absorption spectroscope (TRAS), and ab initio computations has been particularly successful at unraveling the underlying photophysical principles and describing the dissimilarities between the natural and substituted nucleobases.
Abstract
Single-atom substitution within a natural nucleobase-such as replacing oxygen by sulfur in uracil-can result in drastic changes in the relaxation dynamics after UV excitation. While the photodynamics of natural nucleobases like uracil are dominated by pathways along singlet excited states, the photodynamics of thiobases like 2-thiouracil populate the triplet manifold with near unity quantum yield. In the present study, a synergistic approach based on time-resolved photoelectron spectroscopy (TRPES), time-resolved absorption spectroscopy (TRAS), and ab initio computations has been particularly successful at unraveling the underlying photophysical principles and describing the dissimilarities between the natural and substituted nucleobases. Specifically, we find that varying the excitation wavelength leads to differences between gas-phase and condensed-phase experimental results. Systematic trends are observed in the intersystem crossing time constants with varying excitation wavelength, which can be readily interpreted in the context of ab initio calculations performed both in vacuum and including solvent effects. Thus, the combination of TRPES and TRAS experiments with high-level computational techniques allows us to characterize the topology of the potential energy surfaces defining the relaxation dynamics of 2-thiouracil in both gas and condensed phases, as well as investigate the accessibility of conical intersections and crossings, and potential energy barriers along the associated relaxation coordinates.

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Journal ArticleDOI

Spin-Vibronic Mechanism for Intersystem Crossing

TL;DR: The theory and fundamental principles of the spin-vibronic mechanism for ISC are presented, followed by empirical rules to estimate the rate of ISC within this regime.
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Nonadiabatic dynamics: The SHARC approach

TL;DR: The key step of the SHARC approach consists of a diagonalization of the Hamiltonian including these couplings, such that the nuclear dynamics is carried out on potential energy surfaces including the effects of the couplings—this is critical in any applications considering, for example, transition metal complexes or strong laser fields.
Journal ArticleDOI

Photochemical and Photodynamical Properties of Sulfur-Substituted Nucleic Acid Bases.

TL;DR: A broad examination is undertaken, surveying the basic photochemical properties and excited‐state dynamics of sulfur‐substituted analogs of the canonical DNA and RNA nucleobases and the value of fundamental photochemical investigations for driving the development of ultraviolet‐A chemotherapeutics is showcased.
Journal ArticleDOI

Observation of the Sub-100 Femtosecond Population of a Dark State in a Thiobase Mediating Intersystem Crossing

TL;DR: Nonlinear spectroscopy simulations, extrapolated from a detailed CASPT2/MM decay path topology of the solvated system together with an excited state mixed quantum-classical nonadiabatic dynamics, reproduce the experimental results and explain the experimentally observed vibrational coherences.
References
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Journal ArticleDOI

The multi-state CASPT2 method

TL;DR: In this article, an extension of the multiconfigurational second-order perturbation approach CASPT2 is suggested, where several electronic states are coupled at second order via an effective Hamiltonian approach.
Journal ArticleDOI

Main group atoms and dimers studied with a new relativistic ANO basis set

TL;DR: In this article, a basis set of the atomic natural orbital (ANO) type was developed for the main group and rare gas atoms, which was obtained from the average density matrix of the ground and lowest excited states of the atom, the positive and negative ions, and the dimer at its equilibrium geometry.
Journal ArticleDOI

Ultrafast Excited-State Dynamics in Nucleic Acids

TL;DR: The nature and dynamics of the singlet excited electronic states created in nucleic acids and their constituents by UV light are reviewed, finding that these states are highly stable to photochemical decay, perhaps as a result of selection pressure during a long period of molecular evolution.
Journal ArticleDOI

Spin—Orbit Coupling and the Radiationless Processes in Nitrogen Heterocyclics

TL;DR: In this paper, the matrix elements of the spin-orbit operator between the zero-order (spin-free) (n, π*) states of nitrogen heterocyclics are examined.
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