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An Introduction to Genetic Algorithms

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TLDR
An Introduction to Genetic Algorithms focuses in depth on a small set of important and interesting topics -- particularly in machine learning, scientific modeling, and artificial life -- and reviews a broad span of research, including the work of Mitchell and her colleagues.
Abstract
From the Publisher: "This is the best general book on Genetic Algorithms written to date. It covers background, history, and motivation; it selects important, informative examples of applications and discusses the use of Genetic Algorithms in scientific models; and it gives a good account of the status of the theory of Genetic Algorithms. Best of all the book presents its material in clear, straightforward, felicitous prose, accessible to anyone with a college-level scientific background. If you want a broad, solid understanding of Genetic Algorithms -- where they came from, what's being done with them, and where they are going -- this is the book. -- John H. Holland, Professor, Computer Science and Engineering, and Professor of Psychology, The University of Michigan; External Professor, the Santa Fe Institute. Genetic algorithms have been used in science and engineering as adaptive algorithms for solving practical problems and as computational models of natural evolutionary systems. This brief, accessible introduction describes some of the most interesting research in the field and also enables readers to implement and experiment with genetic algorithms on their own. It focuses in depth on a small set of important and interesting topics -- particularly in machine learning, scientific modeling, and artificial life -- and reviews a broad span of research, including the work of Mitchell and her colleagues. The descriptions of applications and modeling projects stretch beyond the strict boundaries of computer science to include dynamical systems theory, game theory, molecular biology, ecology, evolutionary biology, and population genetics, underscoring the exciting "general purpose" nature of genetic algorithms as search methods that can be employed across disciplines. An Introduction to Genetic Algorithms is accessible to students and researchers in any scientific discipline. It includes many thought and computer exercises that build on and reinforce the reader's understanding of the text. The first chapter introduces genetic algorithms and their terminology and describes two provocative applications in detail. The second and third chapters look at the use of genetic algorithms in machine learning (computer programs, data analysis and prediction, neural networks) and in scientific models (interactions among learning, evolution, and culture; sexual selection; ecosystems; evolutionary activity). Several approaches to the theory of genetic algorithms are discussed in depth in the fourth chapter. The fifth chapter takes up implementation, and the last chapter poses some currently unanswered questions and surveys prospects for the future of evolutionary computation.

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Journal Article

A genetic Algorithm-Based feature selection

TL;DR: The main contributions of this article are the development of a GA-based feature selector using a novel fitness function (kNN-based classification error) which enabled the GA to obtain a combinatorial set of feature giving rise to optimal accuracy.
Journal ArticleDOI

Theory of genetic algorithms II: models for genetic operators over the string-tensor representation of populations and convergence to global optima for arbitrary fitness function under scaling

TL;DR: This work presents a theoretical framework for an asymptotically converging, scaled genetic algorithm which uses an arbitrary-size alphabet and common scaled genetic operators, and discusses several versions of the crossover operator and their interplay with mutation.
Journal ArticleDOI

Made to Measure: Ecological Rationality in Structured Environments

TL;DR: The impact of frequency and significance structure on the performance of a range of candidate decision-making mechanisms is explored and it is shown that the character of this impact is complex, since structured environments demand that decision-makers trade off general performance against performance on important subsets of test items.
Journal ArticleDOI

A genetic algorithm for the identification of conformationally invariant regions in protein molecules

TL;DR: A method is presented that categorizes atoms in a molecule as either conformationally invariant or flexible by automatic analysis of an ensemble of conformers, and a criterion is suggested for testing the identity of two three-dimensional models within experimental error without any explicit superposition.
Journal ArticleDOI

You're one in a googol: optimizing genes for protein expression

TL;DR: A brief survey of the literature is offered, the major challenges in interpreting existing data and constructing robust design algorithms are outlined, and a way to proceed towards the goal of rational sequence engineering is proposed.
References
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Book

Genetic algorithms in search, optimization, and machine learning

TL;DR: In this article, the authors present the computer techniques, mathematical tools, and research results that will enable both students and practitioners to apply genetic algorithms to problems in many fields, including computer programming and mathematics.
Journal ArticleDOI

Optimization by Simulated Annealing

TL;DR: There is a deep and useful connection between statistical mechanics and multivariate or combinatorial optimization (finding the minimum of a given function depending on many parameters), and a detailed analogy with annealing in solids provides a framework for optimization of very large and complex systems.
Book

The Evolution of Cooperation

TL;DR: In this paper, a model based on the concept of an evolutionarily stable strategy in the context of the Prisoner's Dilemma game was developed for cooperation in organisms, and the results of a computer tournament showed how cooperation based on reciprocity can get started in an asocial world, can thrive while interacting with a wide range of other strategies, and can resist invasion once fully established.
Book ChapterDOI

Learning internal representations by error propagation

TL;DR: This chapter contains sections titled: The Problem, The Generalized Delta Rule, Simulation Results, Some Further Generalizations, Conclusion.
Book

Genetic Programming: On the Programming of Computers by Means of Natural Selection

TL;DR: This book discusses the evolution of architecture, primitive functions, terminals, sufficiency, and closure, and the role of representation and the lens effect in genetic programming.
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Give me a comprehensive book about the genetic algorithm?

"An Introduction to Genetic Algorithms" is a comprehensive book that covers the background, history, applications, and theory of genetic algorithms.