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Columnaris disease in fish: a review with emphasis on bacterium-host interactions

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TLDR
This review aims to summarize the pathogenesis data emphasizing the areas meriting further investigation of columnaris disease, and elaborating on the agent and the disease it causes.
Abstract
Flavobacterium columnare (F. columnare) is the causative agent of columnaris disease. This bacterium affects both cultured and wild freshwater fish including many susceptible commercially important fish species. F. columnare infections may result in skin lesions, fin erosion and gill necrosis, with a high degree of mortality, leading to severe economic losses. Especially in the last decade, various research groups have performed studies aimed at elucidating the pathogenesis of columnaris disease, leading to significant progress in defining the complex interactions between the organism and its host. Despite these efforts, the pathogenesis of columnaris disease hitherto largely remains unclear, compromising the further development of efficient curative and preventive measures to combat this disease. Besides elaborating on the agent and the disease it causes, this review aims to summarize these pathogenesis data emphasizing the areas meriting further investigation.

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Use of probiotics in aquaculture of China-a review of the past decade.

TL;DR: Wang et al. as mentioned in this paper discussed species, effects, and mode of actions of probiotics in Chinese aquaculture since 2008, and the challenges and future directions for research are also discussed.
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Gut microbiota metagenomics in aquaculture: factors influencing gut microbiome and its physiological role in fish

TL;DR: In this paper, a review of information related to the fish gut microbiome, their function and their importance in aquaculture is discussed; such information includes the effect of the gut microbiome on the physiology of fish, gut microbe composition of different fish, factors affecting the gut microbial composition of the fish and the immunological effect of gut microbes in fish.
Journal ArticleDOI

A genome-wide association study in catfish reveals the presence of functional hubs of related genes within QTLs for columnaris disease resistance

TL;DR: Four QTLs associated with columnaris resistance in catfish are revealed and many candidate genes on the four associated regions are involved in PI3K pathway that is known to be required by many bacteria for efficient entry into the host.
Journal ArticleDOI

Bacteriophage remediation of bacterial pathogens in aquaculture: a review of the technology

TL;DR: Information is reviewed on phage specificity, host resistance, routes of administration, and dosing of fish and shellfish, and limitations in phage research are described.
Journal ArticleDOI

Long-term genomic coevolution of host-parasite interaction in the natural environment

TL;DR: Changes in the resistance and CRISPR loci of bacteria and the infectivity, host range and genome size of phage over multiple years in an aquaculture environment are shown.
References
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Journal ArticleDOI

Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family.

TL;DR: In this paper minimal standards for the description of new genera and cultivable species in the family Flavobacteriaceae are proposed in accordance with Recommendation 30b of the Bacteriological Code (1990 Revision).
Journal ArticleDOI

Bacterial small-molecule signaling pathways.

TL;DR: Recent research into two fundamental bacterial small-molecule signaling pathways are reviewed, suggesting how these two pathways may converge to control complex processes including multicellularity, biofilm formation, and virulence.
Journal ArticleDOI

Cutting a gordian knot: Emended classification and description of the genus Flavobacterium, emended description of the family Flavobacteriaceae, and proposal of Flavobacterium hydatis nom nov (basonym, Cytophaga aquatilis Strohl and Tait 1978).

TL;DR: The phylogenetic positions and G+C contents of most species belonging to the genera Flavobacterium, Cytophaga, and Flexibacter and several related taxa were determined and new combinations for 7 of the 10 validly described species included in this genus are proposed.
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