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Open AccessJournal ArticleDOI

Directed collective motion of bacteria under channel confinement

TLDR
In this article, the authors show that confinement into a long and narrow macroscopic "racetrack" geometry stabilises bacterial motion to form a steady unidirectional circulation.
Abstract
Dense suspensions of swimming bacteria are known to exhibit collective behaviour arising from the interplay of steric and hydrodynamic interactions. Unconfined suspensions exhibit transient, recurring vortices and jets, whereas those confined in circular domains may exhibit order in the form of a spiral vortex. Here we show that confinement into a long and narrow macroscopic 'racetrack' geometry stabilises bacterial motion to form a steady unidirectional circulation. This motion is reproduced in simulations of discrete swimmers that reveal the crucial role that bacteria-driven fluid flows play in the dynamics. In particular, cells close to the channel wall produce strong flows which advect cells in the bulk against their swimming direction. We examine in detail the transition from a disordered state to persistent directed motion as a function of the channel width, and show that the width at the crossover point is comparable to the typical correlation length of swirls seen in the unbounded system. Our results shed light on the mechanisms driving the collective behaviour of bacteria and other active matter systems, and stress the importance of the ubiquitous boundaries found in natural habitats.

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Topological sound in active-liquid metamaterials

TL;DR: In this paper, the authors exploit a mapping between density waves on top of a chiral flow and electrons in a synthetic gauge field to lay out design principles for artificial structures termed topological active metamaterials, which support topologically protected sound modes that propagate unidirectionally, without backscattering, along either sample edges or domain walls.
Journal ArticleDOI

Rheology of Active Fluids

TL;DR: In this paper, an active fluid denotes a viscous suspension of particles, cells, or macromolecules able to convert chemical energy into mechanical work by generating stresses on the microscale.
Journal ArticleDOI

Transition from turbulent to coherent flows in confined three-dimensional active fluids

TL;DR: It is demonstrated that 3D confinements and boundaries robustly transform turbulent-like dynamics of bulk active fluids into self-organized coherent macroscopic flows that persist on length scales ranging from micrometers to meters and time scales of hours.
Journal ArticleDOI

Onset of meso-scale turbulence in active nematics

TL;DR: This work shows how the motion of active matter along a micro-channel transitions to meso-scale turbulence through the evolution of locally disordered patches (active puffs) from an ordered vortex-lattice flow state, and demonstrates that the stationary critical exponents of this transition in a channel coincide with the directed percolation universality class.
Journal ArticleDOI

Self-organized dynamics and the transition to turbulence of confined active nematics

TL;DR: It is shown that confining a model experimental active nematic converts bulk chaotic motion into coherent circulatory flows, suggesting the possibility of exploiting geometric design to encode the spatiotemporal dynamics of topological defects, thereby endowing synthetic materials with the self-organized capabilities heretofore mainly found in living organisms.
References
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Journal ArticleDOI

Mechanisms of biofilm resistance to antimicrobial agents

TL;DR: Owing to the heterogeneous nature of the biofilm, it is likely that there are multiple resistance mechanisms at work within a single community.
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The Mechanics and Statistics of Active Matter

TL;DR: In this paper, a unified view of the many kinds of active matter is presented, encompassing not only living systems but inanimate analogs, including all living organisms and their motile constituents such as molecular motors.
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Fruiting body formation by Bacillus subtilis

TL;DR: Fruiting body formation depended on regulatory genes required early in sporulation and on genes evidently needed for exopolysaccharide and surfactin production, an indication that multicellularity has been lost during domestication of B. subtilis.
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From disorder to order in marching locusts.

TL;DR: This work confirmed the prediction of a rapid transition from disordered to ordered movement and identified a critical density for the onset of coordinated marching in locust nymphs, and demonstrated a dynamic instability in motion at densities typical of locusts in the field.
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Self-concentration and large-scale coherence in bacterial dynamics.

TL;DR: It is found in sessile drops that flows related to those in the Boycott effect of sedimentation carry bioconvective plumes down the slanted meniscus and concentrate cells at the drop edge, while in pendant drops such self-concentration occurs at the bottom.
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