Journal ArticleDOI
Genetic diversity of non-pathogenic Clavibacter strains isolated from tomato seeds.
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TLDR
It is speculated that tomato seeds likely represent a larger reservoir of unexplored Clavibacter diversity, after total DNA-DNA hybridization and sequence analysis of gyrB and dnaA proved that they belong to the Cm species but can be unambiguously separated from Cmm.About:
This article is published in Systematic and Applied Microbiology.The article was published on 2013-09-01. It has received 18 citations till now. The article focuses on the topics: Clavibacter michiganensis & Seed contamination.read more
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Journal ArticleDOI
Bacterial Canker of Tomato: Current Knowledge of Detection, Management, Resistance, and Interactions
TL;DR: Genetic plant mechanisms conferring resistance to clavibacter are apparently complex, and breeders have yet to develop disease-resistant cultivars, and researchers have avoided intensive work on this organism.
Journal ArticleDOI
Seed-associated subspecies of the genus Clavibacter are clearly distinguishable from Clavibacter michiganensis subsp. michiganensis
TL;DR: Two distinct populations of seed-associated members of the genus Clavibacter that differed from each other, as well as from all other describedSubspecies designations are proposed for separate non-pathogenic subpopulations of ClAvibacter michiganensis.
Journal ArticleDOI
Genomic Analysis of Clavibacter michiganensis Reveals Insight Into Virulence Strategies and Genetic Diversity of a Gram-Positive Bacterial Pathogen
Shree Prasad Thapa,Sivakumar Pattathil,Michael G. Hahn,Marie-Agnès Jacques,Robert L. Gilbertson,Gitta Coaker +5 more
TL;DR: The sequenced and assembled genomes of 11 C. michiganensis strains isolated from infected tomato fields in California as well as five Clavibacter strains that colonize tomato endophytically but are not pathogenic in this host revealed genetic diversity among strains consistent with multiple introduction events.
Journal ArticleDOI
Comparative genome analysis of pathogenic and non-pathogenic Clavibacter strains reveals adaptations to their lifestyle
Joanna Zaluga,Pieter Stragier,Steve Baeyen,Annelies Haegeman,Johan Van Vaerenbergh,Martine Maes,Paul De Vos +6 more
TL;DR: The genome sequence of the non-pathogenic Clavibacter strain LMG 26808 and the comparative analyses with other pathogenic Cl Cavibacter strains provided a better understanding of the genetic bases of virulence and adaptation mechanisms present in the genus Clvibacter.
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Clavibacter michiganensis subsp. phaseoli subsp. nov., pathogenic in bean.
TL;DR: Results showed that strain LPPA 982T did not represent any known subspecies of C. michiganensis, andPathogenicity tests revealed that the strain is a bean pathogen causing a newly identified bacterial disease that is named bacterial bean leaf yellowing.
References
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Book
Molecular Cloning: A Laboratory Manual
TL;DR: Molecular Cloning has served as the foundation of technical expertise in labs worldwide for 30 years as mentioned in this paper and has been so popular, or so influential, that no other manual has been more widely used and influential.
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Basic Local Alignment Search Tool
TL;DR: A new approach to rapid sequence comparison, basic local alignment search tool (BLAST), directly approximates alignments that optimize a measure of local similarity, the maximal segment pair (MSP) score.
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Clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
TL;DR: The sensitivity of the commonly used progressive multiple sequence alignment method has been greatly improved and modifications are incorporated into a new program, CLUSTAL W, which is freely available.
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MEGA5: Molecular Evolutionary Genetics Analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
Koichiro Tamura,Daniel S. Peterson,Nicholas Peterson,Glen Stecher,Masatoshi Nei,Sudhir Kumar +5 more
TL;DR: The newest addition in MEGA5 is a collection of maximum likelihood (ML) analyses for inferring evolutionary trees, selecting best-fit substitution models, inferring ancestral states and sequences, and estimating evolutionary rates site-by-site.
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Precise Measurement of the G+C Content of Deoxyribonucleic Acid by High-Performance Liquid Chromatography
TL;DR: High-performance liquid chromatography is a promising alternative for determining the G+C content of bacterial deoxyribonucleic acid (DNA) and may also be more accurate than indirect methods, such as the buoyant density and thermal denaturation methods.
Related Papers (5)
The Clavibacter michiganensis Subspecies: Molecular Investigation of Gram-Positive Bacterial Plant Pathogens
The Genome Sequence of the Tomato-Pathogenic Actinomycete Clavibacter michiganensis subsp. michiganensis NCPPB382 Reveals a Large Island Involved in Pathogenicity
Karl-Heinz Gartemann,Birte Abt,Thomas Bekel,Annette Burger,Jutta Engemann,Monika Flügel,Lars Gaigalat,Alexander Goesmann,Ines Gräfen,Jörn Kalinowski,Olaf Kaup,Oliver Kirchner,Lutz Krause,Burkhard Linke,Alice C. McHardy,Folker Meyer,Sandra Pohle,Christian Rückert,Susanne Schneiker,Eva-Maria Zellermann,Alfred Pühler,Rudolf Eichenlaub,Olaf Kaiser,Daniela Bartels +23 more