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Daniela Bartels
Researcher at Argonne National Laboratory
Publications - 28
Citations - 13713
Daniela Bartels is an academic researcher from Argonne National Laboratory. The author has contributed to research in topics: Genome & Genome project. The author has an hindex of 24, co-authored 28 publications receiving 12173 citations. Previous affiliations of Daniela Bartels include University of Chicago & Bielefeld University.
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Journal ArticleDOI
The RAST Server: Rapid Annotations using Subsystems Technology
Ramy K. Aziz,Ramy K. Aziz,Daniela Bartels,Aaron A. Best,Matthew DeJongh,Terrence Disz,Terrence Disz,Robert Edwards,Kevin Formsma,Svetlana Gerdes,Elizabeth M. Glass,Michael Kubal,Folker Meyer,Folker Meyer,Gary J. Olsen,Gary J. Olsen,Robert Olson,Robert Olson,Andrei L. Osterman,Ross Overbeek,Leslie Klis McNeil,Daniel Paarmann,Tobias Paczian,Bruce Parrello,Gordon D. Pusch,Claudia I. Reich,Rick Stevens,Rick Stevens,Olga Vassieva,Veronika Vonstein,Andreas Wilke,Olga Zagnitko +31 more
TL;DR: A fully automated service for annotating bacterial and archaeal genomes that identifies protein-encoding, rRNA and tRNA genes, assigns functions to the genes, predicts which subsystems are represented in the genome, uses this information to reconstruct the metabolic network and makes the output easily downloadable for the user.
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The complete Corynebacterium glutamicum ATCC 13032 genome sequence and its impact on the production of l-aspartate-derived amino acids and vitamins
Jörn Kalinowski,Brigitte Bathe,Daniela Bartels,Nicole Bischoff,Michael Bott,Andreas Burkovski,Nicole Dusch,Lothar Eggeling,Bernhard J. Eikmanns,Lars Gaigalat,Alexander Goesmann,Michael Hartmann,Klaus Huthmacher,Reinhard Krämer,Burkhard Linke,Alice C. McHardy,Folker Meyer,Bettina Möckel,Walter Pfefferle,Alfred Pühler,Daniel Rey,Christian Rückert,Oliver Rupp,Hermann Sahm,Volker F. Wendisch,Iris Wiegräbe,Andreas Tauch +26 more
TL;DR: These analyses confirm the taxonomic position of C. glutamicum as related to Mycobacteria and show a broad metabolic diversity as expected for a bacterium living in the soil.
Journal ArticleDOI
GenDB—an open source genome annotation system for prokaryote genomes
Folker Meyer,Alexander Goesmann,Alice C. McHardy,Daniela Bartels,Thomas Bekel,Jörn Clausen,Jörn Kalinowski,Burkhard Linke,Oliver Rupp,Robert Giegerich,Alfred Pühler +10 more
TL;DR: A genome annotation system for prokaryote genomes, which is well tested and readily adaptable to different tasks, and can be employed as a flexible framework for the large-scale evaluation of different annotation strategies.
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Genome sequence of the ubiquitous hydrocarbon-degrading marine bacterium Alcanivorax borkumensis
Susanne Schneiker,Vitor A. P. Martins dos Santos,Daniela Bartels,Thomas Bekel,Martina Brecht,Jens Buhrmester,Tatyana N. Chernikova,Renata Denaro,Manuel Ferrer,Christoph Gertler,Alexander Goesmann,Olga V. Golyshina,Filip Kaminski,Amit N. Khachane,Siegmund Lang,Burkhard Linke,Alice C. McHardy,Alice C. McHardy,Folker Meyer,Taras Nechitaylo,Alfred Pühler,Daniela Regenhardt,Oliver Rupp,Julia S. Sabirova,Werner Selbitschka,Michail M. Yakimov,Kenneth N. Timmis,Frank-Jörg Vorhölter,Stefan Weidner,Olaf Kaiser,Peter N. Golyshin +30 more
TL;DR: The genome sequence provides the basis for the future design of strategies to mitigate the ecological damage caused by oil spills and provides A. borkumensis SK2 with a competitive edge in oil-polluted environments.
Journal ArticleDOI
Complete genome sequence of the myxobacterium Sorangium cellulosum
Susanne Schneiker,Olena Perlova,Olaf Kaiser,Klaus Gerth,Aysel Alici,Matthias Altmeyer,Daniela Bartels,Thomas Bekel,Stefan Beyer,Edna Bode,Helge B. Bode,Christoph J. Bolten,Jomuna V. Choudhuri,Sabrina D. Doss,Yasser A. Elnakady,Bettina Frank,Lars Gaigalat,Alexander Goesmann,Carolin Groeger,Frank Gross,Lars Jelsbak,Lotte Jelsbak,Jörn Kalinowski,Carsten Kegler,Tina Knauber,Sebastian Konietzny,Maren Kopp,Lutz Krause,Daniel Krug,Bukhard Linke,Taifo Mahmud,Rosa Martínez-Arias,Alice C. McHardy,Michelle Merai,Folker Meyer,Sascha Mormann,José Muñoz-Dorado,Juana Pérez,Silke Pradella,Shwan Rachid,Günter Raddatz,Frank Rosenau,Christian Rückert,Florenz Sasse,Maren Scharfe,Stephan C. Schuster,Garret Suen,Anke Treuner-Lange,Gregory J. Velicer,Frank-Jörg Vorhölter,Kira J. Weissman,Roy D. Welch,Silke C. Wenzel,David E. Whitworth,Susanne Wilhelm,Christoph Wittmann,Helmut Blöcker,Alfred Pühler,Rolf Müller +58 more
TL;DR: The complete genome sequence of the model Sorangium strain S. cellulosum So ce56 is reported, which produces several natural products and has morphological and physiological properties typical of the genus, and the circular genome is the largest bacterial genome sequenced to date.