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How to fail at species delimitation.

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TLDR
Researchers should apply a wide range of species delimitation analyses to their data and place their trust in delimitations that are congruent across methods, for in most contexts it is better to fail to delimit species than it is to falsely delimit entities that do not represent actual evolutionary lineages.
Abstract
Species delimitation is the act of identifying species-level biological diversity. In recent years, the field has witnessed a dramatic increase in the number of methods available for delimiting species. However, most recent investigations only utilize a handful (i.e. 2–3) of the available methods, often for unstated reasons. Because the parameter space that is potentially relevant to species delimitation far exceeds the parameterization of any existing method, a given method necessarily makes a number of simplifying assumptions, any one of which could be violated in a particular system. We suggest that researchers should apply a wide range of species delimitation analyses to their data and place their trust in delimitations that are congruent across methods. Incongruence across the results from different methods is evidence of either a difference in the power to detect cryptic lineages across one or more of the approaches used to delimit species and could indicate that assumptions of one or more of the methods have been violated. In either case, the inferences drawn from species delimitation studies should be conservative, for in most contexts it is better to fail to delimit species than it is to falsely delimit entities that do not represent actual evolutionary lineages.

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Journal ArticleDOI

Speciation, range contraction and extinction in the endemic New Zealand King Shag complex.

TL;DR: The analyses show that the King Shag was formerly widespread around southern coasts of the North Island and the northern parts of the South Island but experienced population and lineage extinctions, and range contraction, probably after Polynesian arrival, and this history parallels range contractions of other New Zealand seabirds.
Journal ArticleDOI

Species delimitation and multi-locus species tree solve an old taxonomic problem for European squat lobsters of the genus Munida Leach, 1820

TL;DR: Phylogenetic analyses revealed three independent lineages with unsolved relationships among them, including high genetic distances for some species, which indicate highly divergent lineages of the European Munida and several events of colonization along the eastern Atlantic.
Journal ArticleDOI

Species delimitation in Neotropical fishes of the genus Characidium (Teleostei, Characiformes)

TL;DR: cies delimitation using mitochondrial data strongly supports the presence of two sympatric species within C. alipioi in southeastern Brazil despite limited morphological variation and conserved chromosomal patterns and provides a framework to further the study of systematics and evolution within Characidium.
Journal ArticleDOI

Integrative taxonomy identifies a new stingray species of the genus Hypanus Rafinesque, 1818 (Dasyatidae, Myliobatiformes), from the Tropical Southwestern Atlantic.

TL;DR: An integrative approach by congruence of genetics, morphology, and ecological niche modelling was used to delimit a new species of Hypanus Rafinesque, 1818, a recently resurrected genus of marine stingrays comprising eight species, five of which occur in the Western Atlantic.
References
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Book

Model Selection and Multimodel Inference: A Practical Information-Theoretic Approach

TL;DR: The second edition of this book is unique in that it focuses on methods for making formal statistical inference from all the models in an a priori set (Multi-Model Inference).
Journal ArticleDOI

Inference of population structure using multilocus genotype data

TL;DR: Pritch et al. as discussed by the authors proposed a model-based clustering method for using multilocus genotype data to infer population structure and assign individuals to populations, which can be applied to most of the commonly used genetic markers, provided that they are not closely linked.
Book

On the Origin of Species by Means of Natural Selection, or, The Preservation of Favoured Races in the Struggle for Life

TL;DR: The "Penguin Classics" edition of "On the Origin of Species" as discussed by the authors contains an introduction and notes by William Bynum, and features a cover designed by Damien Hirst.
Book

Phylogeography: The History and Formation of Species

John C. Avise
TL;DR: This chapter discusses the history and Purview of Phylogeography, Genealogical Concordance, and Speciation Processes and Extended Genealogy Works and its applications to Speciation and Beyond.
Journal ArticleDOI

The Origin of Species by means of Natural Selection; or the Preservation of Favoured Races in the Struggle for Life

Alfred W. Bennett
- 01 Feb 1872 - 
TL;DR: A man is unworthy of the name of a man of science who, whatever may be his special branch of study, has not materially altered his views on some important points within the last twelve years.
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