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Open AccessJournal ArticleDOI

Identification and Mutational Analysis of Bacteriophage PRD1 Holin Protein P35

Pia S. Rydman, +1 more
- 01 Jul 2003 - 
- Vol. 185, Iss: 13, pp 3795-3803
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TLDR
The identification of the membrane-containing phage PRD1 holin gene (gene XXXV) is described and the charged amino acids at the protein C terminus are involved in the timing of host cell lysis.
Abstract
Holin proteins are phage-induced integral membrane proteins which regulate the access of lytic enzymes to host cell peptidoglycan at the time of release of progeny viruses by host cell lysis. We describe the identification of the membrane-containing phage PRD1 holin gene (gene XXXV). The PRD1 holin protein (P35, 12.8 kDa) acts similarly to its functional counterpart from phage lambda (gene S), and the defect in PRD1 gene XXXV can be corrected by the presence of gene S of lambda. Several nonsense, missense, and insertion mutations in PRD1 gene XXXV were analyzed. These studies support the overall conclusion that the charged amino acids at the protein C terminus are involved in the timing of host cell lysis.

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Journal ArticleDOI

Phage lysis: three steps, three choices, one outcome.

TL;DR: The lysis of bacterial hosts by double-strand DNA bacteriophages, once thought to reflect merely the accumulation of sufficient lysozyme activity during the infection cycle, has been revealed to recently be revealed to be a carefully regulated and temporally scheduled process.
Journal ArticleDOI

Phage lysis: do we have the hole story yet?

TL;DR: In infections of Gram-negative bacteria, lysis is a three step process, with a choice of two effectors for each step, and a third class of lysis protein, the spanin, is required for disruption of the outer membrane.
Journal ArticleDOI

The pinholin of lambdoid phage 21: control of lysis by membrane depolarization.

TL;DR: The phage 21 holin, S(21), forms small membrane holes that depolarize the membrane and is designated as a pinholin, as opposed to large-hole-forming holins, like S(lambda), which require secreted SAR endolysins.
Journal ArticleDOI

Micron-scale holes terminate the phage infection cycle

TL;DR: Surprisingly, the scale of the holes caused by S105, the λ-holin, have been captured in vivo by cryo-EM and are at least an order of magnitude greater than any previously described membrane channel.
Journal ArticleDOI

Global Changes in Cellular Gene Expression during Bacteriophage PRD1 Infection

TL;DR: Changes in Escherichia coli gene expression during bacteriophage PRD1 infection using microarray technology are reported, indicating that there is no major reprogramming of the host during early infection.
References
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Journal ArticleDOI

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

TL;DR: This assay is very reproducible and rapid with the dye binding process virtually complete in approximately 2 min with good color stability for 1 hr with little or no interference from cations such as sodium or potassium nor from carbohydrates such as sucrose.
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TL;DR: Molecular Cloning has served as the foundation of technical expertise in labs worldwide for 30 years as mentioned in this paper and has been so popular, or so influential, that no other manual has been more widely used and influential.
Journal ArticleDOI

Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes

TL;DR: A new membrane protein topology prediction method, TMHMM, based on a hidden Markov model is described and validated, and it is discovered that proteins with N(in)-C(in) topologies are strongly preferred in all examined organisms, except Caenorhabditis elegans, where the large number of 7TM receptors increases the counts for N(out)-C-in topologies.
Journal ArticleDOI

Use of bacteriophage T7 RNA polymerase to direct selective high-level expression of cloned genes

TL;DR: A gene expression system based on bacteriophage T7 RNA polymerase has been developed and high levels of accumulation suggest that the RNAs are relatively stable, perhaps in part because their great length and/or stem-and-loop structures at their 3' ends help to protect them against exonucleolytic degradation.
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