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Open AccessJournal ArticleDOI

Isolation and Characterization of Anaerobic Ethylbenzene Dehydrogenase, a Novel Mo-Fe-S Enzyme

Hope A. Johnson, +2 more
- 01 Aug 2001 - 
- Vol. 183, Iss: 15, pp 4536-4542
TLDR
Sequence analysis and biochemical data suggest that ethylbenzene dehydrogenase is a novel member of the dimethyl sulfoxide reductase family of molybdopterin-containing enzymes.
Abstract
Accidental spills and leaking underground storage tanks, as well as natural petroleum seeps, have released aromatic hydrocarbons into natural environments and led to abundant contamination of water resources (32). Aromatic hydrocarbons comprise one of the least reactive classes of organic molecules. Their relative inertness can be attributed to the absence of a functional group (e.g., hydroxyl, carbonyl, or carboxyl) and the resonance energy stabilization of the aromatic ring. These properties hamper rapid biodegradation of alkylbenzenes in many environments. However, some prokaryotic microorganisms employ intriguing metabolic strategies to activate alkylbenzenes leading to their oxidation in catabolic pathways. Under aerobic conditions, the well-characterized mono- and dioxygenases catalyze the activation of hydrocarbons by introducing a hydroxyl group via oxidative hydroxylation with molecular oxygen as cosubstrate (16). The absence of molecular oxygen in anoxic environments precludes this activation mode, and novel, alternative mechanisms are expected to operate under such conditions. In recent years, two mechanisms for initiating anaerobic metabolism of alkylbenzenes have emerged: methyl-substituted benzenes, such as toluene or m-xylene, are activated by enzymatic addition to fumarate to form benzylsuccinate or its methyl homolog (5, 6, 9, 25, 28, 34), whereas ethylbenzene (and possibly other alkylbenzenes with carbon chain length of ≥2) is oxidatively activated by an anaerobic dehydrogenation of the benzylic carbon to form 1-phenylethanol (3, 29). Ethylbenzene dehydrogenase is a novel enzyme in that it is the first enzyme shown to catalyze the hydroxylation of an aromatic hydrocarbon in the absence of molecular oxygen (Fig. ​(Fig.1).1). Stable isotope labeling studies showed that the hydroxyl group of 1-phenylethanol is derived from water (3). FIG. 1 Ethylbenzene dehydrogenase reaction as the first step in anaerobic ethylbenzene oxidation. In vitro studies with Azoarcus sp. strain EB1 demonstrated that ethylbenzene dehydrogenase activity is membrane associated and couples the oxidation of ethylbenzene to the reduction of p-benzoquinone (22). This dehydrogenation reaction is highly stereoselective and solely forms (S)-(−)-1-phenylethanol. The enzyme activity is expressed when Azoarcus sp. strain EB1 is grown anaerobically on ethylbenzene, as well as on 1-phenylethanol or acetophenone, as the sole carbon and electron source, but it is not expressed when cells are grown with benzoate. 1-Phenylethanol, acetophenone, and benzoate are intermediates in anaerobic ethylbenzene oxidation (3, 29). We report here for the first time on the purification and initial characterization of the novel ethylbenzene dehydrogenase, the cofactor content, and the nucleotide sequence and structure of the genes involved. Based on these findings, as well as on substrate transformation studies, we discuss possible reaction mechanisms for anaerobic ethylbenzene oxidation.

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Citations
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Journal ArticleDOI

Recent Advances in Petroleum Microbiology

TL;DR: The physiological responses of microorganisms to the presence of hydrocarbons, including cell surface alterations and adaptive mechanisms for uptake and efflux of these substrates, have been characterized and used to investigate the dynamics of microbial communities in petroleum-impacted ecosystems.
Journal ArticleDOI

Microbial degradation of aromatic compounds — from one strategy to four

TL;DR: These strategies are based on different ring activation mechanisms that consist of either formation of a non-aromatic ring-epoxide under oxic conditions, or reduction of the aromatic ring under anoxic conditions using one of two completely different systems.
Journal ArticleDOI

How to make a living from anaerobic ammonium oxidation.

TL;DR: An analysis of the metabolic opportunities of anammox bacteria suggests alternative chemolithotrophic lifestyles that are independent of these compounds, and current concepts are still largely hypothetical and put forward the most intriguing questions that need experimental answers.
Journal ArticleDOI

Anaerobic Catabolism of Aromatic Compounds: a Genetic and Genomic View

TL;DR: This review focuses on the recent findings that standard molecular biology approaches together with new high-throughput technologies have provided regarding the genetics, regulation, ecophysiology, and evolution of anaerobic aromatic degradation pathways, revealing that the anaerobia catabolism of aromatic compounds is more diverse and widespread than previously thought.
Journal ArticleDOI

Biogeochemistry of Microbial Coal-Bed Methane

TL;DR: The anaerobic metabolism of the bacteria breaking coal down to methanogenic substrates, the likely rate-limiting step in biogenic gas production, is not fully understood and coal molecules are more recalcitrant to biodegradation with increasing thermal m...
References
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Journal ArticleDOI

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

TL;DR: This assay is very reproducible and rapid with the dye binding process virtually complete in approximately 2 min with good color stability for 1 hr with little or no interference from cations such as sodium or potassium nor from carbohydrates such as sucrose.
Journal ArticleDOI

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

TL;DR: A new criterion for triggering the extension of word hits, combined with a new heuristic for generating gapped alignments, yields a gapped BLAST program that runs at approximately three times the speed of the original.
Journal ArticleDOI

Genetic Applications of an Inverse Polymerase Chain Reaction

TL;DR: The feasibility of IPCR is shown by amplifying the sequences that flank an IS1 element in the genome of a natural isolate of Escherichia coli.
Journal ArticleDOI

The Mononuclear Molybdenum Enzymes

TL;DR: It is now well-established that all molybdenum-containing enzymes other than nitrogenase fall into three large and mutually exclusive families, as exemplified by the enzymes xanthine oxidation, sulfite oxidase, and DMSO reductase; these enzymes represent the focus of the present account.
Journal ArticleDOI

The biodegradation of aromatic hydrocarbons by bacteria

Mark R. Smith
- 01 Jan 1990 - 
TL;DR: The biodegradation of benzene, certain arenes, biphenyl and selected fused aromatic hydrocarbons, by single bacterial isolates, are dealt with in detail.
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