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Open AccessJournal ArticleDOI

Map-Based Cloning, Phylogenetic, and Microsynteny Analyses of ZmMs20 Gene Regulating Male Fertility in Maize

TLDR
A complete GMS mutant (ms20) is reported, which displays abnormal anther cuticle and pollen development and was found to be a new allele of IPE1 encoding a glucose methanol choline (GMC) oxidoreductase involved in lipid metabolism in anther.
Abstract
Genic male sterility (GMS) mutant is a useful germplasm resource for both theory research and production practice. The identification and characterization of GMS genes, and assessment of male-sterility stability of GMS mutant under different genetic backgrounds in Zea may (maize) have (1) deepened our understanding of the molecular mechanisms controlling anther and pollen development, and (2) enabled the development and efficient use of many biotechnology-based male-sterility (BMS) systems for hybrid breeding. Here, we reported a complete GMS mutant (ms20), which displays abnormal anther cuticle and pollen development. Its fertility restorer gene ZmMs20 was found to be a new allele of IPE1 encoding a glucose methanol choline (GMC) oxidoreductase involved in lipid metabolism in anther. Phylogenetic and microsynteny analyses showed that ZmMs20 was conserved among gramineous species, which provide clues for creating GMS materials in other crops. Additionally, among the 17 maize cloned GMS genes, ZmMs20 was found to be similar to the expression patterns of Ms7, Ms26, Ms6021, APV1, and IG1 genes, which will give some clues for deciphering their functional relationships in regulating male fertility. Finally, two functional markers of ZmMs20/ms20 were developed and tested for creating maize ms20 male-sterility lines in 353 genetic backgrounds, and then an artificial maintainer line of ms20 GMS mutation was created by using ZmMs20 gene, ms20 mutant, and BMS system. This work will promote our understanding of functional mechanisms of male fertility and facilitate molecular breeding of ms20 male-sterility lines for hybrid seed production in maize.

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Journal ArticleDOI

Lipid Metabolism: Critical Roles in Male Fertility and Other Aspects of Reproductive Development in Plants

TL;DR: A deep and broad understanding is provided on lipid metabolism, its related genes and their roles in plant reproductive development, which will facilitate the application of lipid metabolism-related genes in gene editing, haploid and callus induction, molecular breeding and hybrid seed production in crops.
Journal ArticleDOI

Discovering and Constructing ceRNA-miRNA-Target Gene Regulatory Networks during Anther Development in Maize.

TL;DR: The results provide an insight that the ceRNA-miRNA-target gene regulatory networks likely contribute to anther development in maize and further functional studies on a number of ce RNAs, miRNAs, and target genes will facilitate deep understanding on mechanisms of antherDevelopment and sexual plants reproduction.
Journal ArticleDOI

Normal Structure and Function of Endothecium Chloroplasts Maintained by ZmMs33-Mediated Lipid Biosynthesis in Tapetal Cells Are Critical for Anther Development in Maize.

TL;DR: This study characterizes the function of ZmMs33/ZmGPAT6, which encodes a member of the glycerol-3-phosphate acyltransferase (GPAT) family that catalyze the first step ofglycerolipid synthetic pathway, and reveals that normal structure and function of endothecium (En) chloroplasts maintained by Zm Ms33- mediated lipid biosynthesis in tapetal cells are crucial to maize anther development.
Journal ArticleDOI

Genome-wide analysis of maize GPAT gene family and cytological characterization and breeding application of ZmMs33/ZmGPAT6 gene

TL;DR: Genome-wide analysis of maize GPAT gene family, cytological characterization of ZmMs33/ZmGPAT6 gene encoding an ER-localized protein with four conserved motifs, and its molecular breeding application in maize found that 20 GPAT genes (Zm GPAT1-20) could be classified into three distinct clades similar to those of ten GPat genes in Arabidopsis.
Journal ArticleDOI

IRREGULAR POLLEN EXINE2 Encodes a GDSL Lipase Essential for Male Fertility in Maize.

TL;DR: The characterization of a male-sterile mutant irregular pollen exine2 (ipe2) of maize, which displays shrunken anthers and no starch accumulation in mature pollen grains is reported, elucidates GDSL function in anther and pollen development and provides a promising genetic resource for breeding hybrid maize.
References
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Journal ArticleDOI

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TL;DR: An advanced version of the Molecular Evolutionary Genetics Analysis software, which currently contains facilities for building sequence alignments, inferring phylogenetic histories, and conducting molecular evolutionary analysis, is released, which enables the inference of timetrees, as it implements the RelTime method for estimating divergence times for all branching points in a phylogeny.

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Journal ArticleDOI

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TL;DR: FeatureCounts as discussed by the authors is a read summarization program suitable for counting reads generated from either RNA or genomic DNA sequencing experiments, which implements highly efficient chromosome hashing and feature blocking techniques.
Journal ArticleDOI

TopHat: discovering splice junctions with RNA-Seq

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