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Journal ArticleDOI

Massive datasets and machine learning for computational biomedicine: trends and challenges

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TLDR
The most commonly used machine learning and feature mining tools and several new trends and tendencies such as deep learning and biological networks for computational biomedicine are analyzed.
Abstract
This survey paper attempts to cover a broad range of topics related to computational biomedicine. The field has been attracting great attention due to a number of benefits it can provide the society with. New technological and theoretical advances have made it possible to progress considerably. Traditionally, problems emerging in this field are challenging from many perspectives. In this paper, we considered the influence of big data on the field, problems associated with massive datasets in biomedicine and ways to address these problems. We analyzed the most commonly used machine learning and feature mining tools and several new trends and tendencies such as deep learning and biological networks for computational biomedicine.

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Citations
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Journal ArticleDOI

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Adoption and use of AI tools: a research agenda grounded in UTAUT

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Proceedings Article

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Clinician involvement in research on machine learning-based predictive clinical decision support for the hospital setting: A scoping review.

TL;DR: If present, clinical expert involvement is most prevalent when predictive CDSS specifications are made or when system implementations are evaluated, however, clinical experts are less prevalent in developmental stages to verify clinical correctness, select model features, preprocess data, or serve as a gold standard.
References
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Journal ArticleDOI

Random Forests

TL;DR: Internal estimates monitor error, strength, and correlation and these are used to show the response to increasing the number of features used in the forest, and are also applicable to regression.
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Regression Shrinkage and Selection via the Lasso

TL;DR: A new method for estimation in linear models called the lasso, which minimizes the residual sum of squares subject to the sum of the absolute value of the coefficients being less than a constant, is proposed.
Journal ArticleDOI

Collective dynamics of small-world networks

TL;DR: Simple models of networks that can be tuned through this middle ground: regular networks ‘rewired’ to introduce increasing amounts of disorder are explored, finding that these systems can be highly clustered, like regular lattices, yet have small characteristic path lengths, like random graphs.
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Support-Vector Networks

TL;DR: High generalization ability of support-vector networks utilizing polynomial input transformations is demonstrated and the performance of the support- vector network is compared to various classical learning algorithms that all took part in a benchmark study of Optical Character Recognition.
Journal ArticleDOI

Emergence of Scaling in Random Networks

TL;DR: A model based on these two ingredients reproduces the observed stationary scale-free distributions, which indicates that the development of large networks is governed by robust self-organizing phenomena that go beyond the particulars of the individual systems.
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