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Open AccessJournal ArticleDOI

Mating-Type Genes and MAT Switching in Saccharomyces cerevisiae

James E. Haber
- 01 May 2012 - 
- Vol. 191, Iss: 1, pp 33-64
TLDR
Real-time analysis of MAT switching has provided the most detailed description of the molecular events that occur during the homologous recombinational repair of a programmed double-strand chromosome break.
Abstract
Mating type in Saccharomyces cerevisiae is determined by two nonhomologous alleles, MATa and MATα. These sequences encode regulators of the two different haploid mating types and of the diploids formed by their conjugation. Analysis of the MATa1, MATα1, and MATα2 alleles provided one of the earliest models of cell-type specification by transcriptional activators and repressors. Remarkably, homothallic yeast cells can switch their mating type as often as every generation by a highly choreographed, site-specific homologous recombination event that replaces one MAT allele with different DNA sequences encoding the opposite MAT allele. This replacement process involves the participation of two intact but unexpressed copies of mating-type information at the heterochromatic loci, HMLα and HMRa, which are located at opposite ends of the same chromosome-encoding MAT. The study of MAT switching has yielded important insights into the control of cell lineage, the silencing of gene expression, the formation of heterochromatin, and the regulation of accessibility of the donor sequences. Real-time analysis of MAT switching has provided the most detailed description of the molecular events that occur during the homologous recombinational repair of a programmed double-strand chromosome break.

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Citations
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Journal ArticleDOI

Repair of strand breaks by homologous recombination.

TL;DR: The enzymology of the process is discussed, followed by studies on DSB repair in living cells, and a historical context for the current view of HR is provided and how DSBs are processed during HR as well as interactions with other D SB repair pathways are described.
Journal ArticleDOI

Sources of DNA Double-Strand Breaks and Models of Recombinational DNA Repair

TL;DR: In this paper, the authors highlight the chief sources of double-strand break (DSB) and crucial requirements for each of these repair processes, as well as the methods to identify and study intermediate steps in DSB repair by homologous recombination.

Sources of DNA Double-Strand Breaks and Models of Recombinational

TL;DR: This review highlights the chief sources of DSBs and crucial requirements for each of these repair processes, as well as the methods to identify and study intermediate steps in DSB repair by homologous recombination.
Journal ArticleDOI

Genome Engineering with Targetable Nucleases

TL;DR: Three classes of targetable cleavage reagents are described: zinc-finger nucleases, transcription activator-like effector nucleases (TALENs), and CRISPR/Cas RNA-guided nuclease (RGNs), which have been successfully used to modify genomic sequences in a wide variety of cells and organisms, including humans.
Journal ArticleDOI

Mechanisms and Regulation of Mitotic Recombination in Saccharomyces cerevisiae

TL;DR: Several models that have been proposed to explain the mechanism of mitotic recombination are discussed, the genes and proteins involved in various pathways, the genetic and physical assays used to discover and study these genes, and the roles of many of these proteins inside the cell are discussed.
References
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Journal ArticleDOI

Transcriptional silencing and longevity protein Sir2 is an NAD-dependent histone deacetylase

TL;DR: The analysis of two SIR2 mutations supports the idea that this deacetylase activity accounts for silencing, recombination suppression and extension of life span in vivo, and provides a molecular framework of NAD-dependent histone de acetylation that connects metabolism, genomic silencing and ageing in yeast and, perhaps, in higher eukaryotes.
Journal ArticleDOI

Multiple Pathways of Recombination Induced by Double-Strand Breaks in Saccharomyces cerevisiae

TL;DR: This review encompasses different aspects of DSB-induced recombination in Saccharomyces and attempts to relate genetic, molecular biological, and biochemical studies of the processes of DNA repair and recombination.
Journal ArticleDOI

Genetic and Functional Diversification of Small RNA Pathways in Plants

TL;DR: It is concluded that proliferation and diversification of DCL and RDR genes during evolution of plants contributed to specialization of small RNA-directed pathways for development, chromatin structure, and defense.
Journal ArticleDOI

Mechanism of eukaryotic homologous recombination.

TL;DR: HR accessory factors that facilitate other stages of the Rad51- and Dmc1-catalyzed homologous DNA pairing and strand exchange reaction have also been identified.
Journal ArticleDOI

The Sir2 Family of Protein Deacetylases

TL;DR: The role of NAD+, the unusual products of the deacetylation reaction, the Sir2 structure, and the Sir1 and Sir2 chemical inhibitors and activators that were recently identified are discussed.
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