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Open AccessJournal ArticleDOI

Molecular phylogenetics and biogeography of galaxiid fishes (Osteichthyes: Galaxiidae): dispersal, vicariance, and the position of Lepidogalaxias salamandroides.

TLDR
The species-rich genus Galaxias is shown to be polyphyletic and the generic taxonomy of the Galaxiinae is reassessed in the light of phylogenetic relationships, and the loss of this migratory phase may be a major cause of speciation.
Abstract
The galaxiid fishes exhibit a gondwanan distribution. We use mitochondrial DNA sequences to test conflicting vicariant and dispersal biogeographic hypotheses regarding the Southern Hemisphere range of this freshwater group. Although phylogenetic resolution of cytochrome b and 16S rRNA sequences is largely limited to more recent divergences, our data indicate that the radiation can be interpreted as several relatively recent dispersal events superimposed on an ancient gondwanan radiation. Genetic relationships contradict the findings of recent morphological analyses of galaxioid fishes. In particular, we examine several hypotheses regarding phylogenetic placement of the enigmatic Lepidogalaxias. Although most workers consider Lepidogalaxias to be an unusual scaled member of the Southern Hemisphere galaxioids, it has also been suggested that this species is related to the Northern Hemisphere esocoids. Our data strongly suggest that this species is not a galaxiid, and the alternative hypothesized esocoid relationship cannot be rejected. The species-rich genus Galaxias is shown to be polyphyletic and the generic taxonomy of the Galaxiinae is reassessed in the light of phylogenetic relationships. Juvenile saltwater-tolerance is phylogenetically distributed throughout the Galaxiinae, and the loss of this migratory phase may be a major cause of speciation.

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Book ChapterDOI

Darwin's Fishes: Entries (A to ZZZ)

TL;DR: The first letter of the Roman alphabet is the place where the systematic reader and the author of an encyclopedia first meet as discussed by the authors, and it is therefore the place the reader is urged not to judge this book by its first letter(s) - just as it shouldn't be judged by its cover.
OtherDOI

Fish in Spirits of Wine

TL;DR: A transcription of the part devoted to fishes of the * Zoological Notes compiled by Charles Darwin (CD) during the voyage of *Beagle is given in this article. But this was originally copied by Syms *Covington in 1838 or thereabouts, and was originally kept in the Darwin Archive at the Library of Cambridge University as DAR 29.1.

Riverscape-mediated effects of introduced trout on non-diadromous galaxiid fishes in New Zealand

TL;DR: A spatial model predicting exclusion of a 84 vulnerable native fish by introduced trout based on landscape features and non-diadromous galaxiids across trout-invaded 106 riverscapes is developed.
OtherDOI

Darwin's Fishes: Checklist of fish specimens, identified as collected by Charles Darwin on the Beagle voyage, that ought to be present in the collections of the University Museum of Zoology, Cambridge

Adrian Friday
TL;DR: A full manuscript list of Beagle fish that was transcribed from the relevant catalogues is given in this paper, where generic and specific names have been converted to italics for ease of reading.
References
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Journal ArticleDOI

Clustal w: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

TL;DR: The sensitivity of the commonly used progressive multiple sequence alignment method has been greatly improved and modifications are incorporated into a new program, CLUSTAL W, which is freely available.
Journal ArticleDOI

Confidence limits on phylogenies: an approach using the bootstrap.

TL;DR: The recently‐developed statistical method known as the “bootstrap” can be used to place confidence intervals on phylogenies and shows significant evidence for a group if it is defined by three or more characters.
Journal ArticleDOI

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

TL;DR: Some examples were worked out using reported globin sequences to show that synonymous substitutions occur at much higher rates than amino acid-altering substitutions in evolution.
Journal ArticleDOI

Evolutionary trees from DNA sequences: A maximum likelihood approach

TL;DR: A computationally feasible method for finding such maximum likelihood estimates is developed, and a computer program is available that allows the testing of hypotheses about the constancy of evolutionary rates by likelihood ratio tests.